RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 UBQLN1Q9UMX0 589 aaKnown RBP15.36■□□□□ 0.05
ATG4B-206ENST00000405546 NEMP1O14524 444 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 TPP1O14773 563 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SLC5A2P31639 672 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 NUMBP49757 651 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 MRPS5P82675 430 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 TBL3Q12788 808 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 C16orf72Q14CZ0 275 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 DCAF4L1Q3SXM0 396 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SLC9A4Q6AI14 798 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 TNS4Q8IZW8 715 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 ZSCAN18Q8TBC5 510 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 PPP4R1Q8TF05 950 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 PRICKLE1Q96MT3 831 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SIK2Q9H0K1 926 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 VRTNQ9H8Y1 702 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 XAB2Q9HCS7 855 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 ZNF358Q9NW07 568 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 ZNF180Q9UJW8 692 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 HBS1LQ9Y450 684 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 EEF2KO00418 725 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 XPOTO43592 962 aaKnown RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 PENKP01210 267 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 FDFT1P37268 417 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 COPAP53621 1224 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SH2D4BQ5SQS7 431 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 FRMD7Q6ZUT3 714 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 CMC1Q7Z7K0 106 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 ZNF669Q96BR6 464 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 PFDN4Q9NQP4 134 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 KCNK4Q9NYG8 393 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 CDH22Q9UJ99 828 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 PSAT1Q9Y617 370 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 AP4B1Q9Y6B7 739 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 TRIP11Q15643 1979 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 MDM4O15151 490 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-206ENST00000405546 CPOXP36551 454 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SERPINB5P36952 375 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 TAF6P49848 677 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 BEX3Q00994 111 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 MARCH8Q5T0T0 291 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 SYPL2Q5VXT5 272 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 ITPRIPL1Q6GPH6 555 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 OR52K1Q8NGK4 314 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 NFKBIZQ9BYH8 718 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 MAF1Q9H063 256 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 ARMC7Q9H6L4 198 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 VTA1Q9NP79 307 aa15.35■□□□□ 0.05
ATG4B-206ENST00000405546 FKBP6O75344 327 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 NCAM1P13591 858 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 EPHX2P34913 555 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 GJA5P36382 358 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 RPL5P46777 297 aaKnown RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 CDH15P55291 814 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 TMCO4Q5TGY1 634 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 WSCD1Q658N2 575 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 RNF139Q8WU17 664 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 GAB3Q8WWW8 586 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 TNIP3Q96KP6 325 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 CATSPER2Q96P56 530 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 FRMD8Q9BZ67 464 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 UNKQ9C0B0 810 aaKnown RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 APOBEC2Q9Y235 224 aaKnown RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 SCN1AP35498 2009 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 BEST1O76090 585 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 CSPG5O95196 566 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 MMP3P08254 477 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 IGFBP6P24592 240 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 TKTL1P51854 596 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 SLC44A4Q53GD3 710 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 NCBP2-AS2Q69YL0 99 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 RWDD4Q6NW29 188 aaKnown RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 MARK4Q96L34 752 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 SYBUQ9NX95 663 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 STX16-NPEPL1H3BU86 382 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 CTSHP09668 335 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 MAGEA8P43361 318 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 NAA20P61599 178 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 KLC3Q6P597 504 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 ANKRD23Q86SG2 305 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 RNF168Q8IYW5 571 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 SNX27Q96L92 541 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 OXCT2Q9BYC2 517 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-206ENST00000405546 XPNPEP3Q9NQH7 507 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 PCDHA11Q9Y5I1 949 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 SNX10Q9Y5X0 201 aa15.34■□□□□ 0.05
ATG4B-206ENST00000405546 A0A0A0MRY4 1105 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 CRTAMO95727 393 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 TSHRP16473 764 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
ATG4B-206ENST00000405546 PGGT1BP53609 377 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 ITGA9Q13797 1035 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 HFE2Q6ZVN8 426 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 CHSY1Q86X52 802 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 TRIML2Q8N7C3 387 aa15.33■□□□□ 0.04
ATG4B-206ENST00000405546 CELF6Q96J87 481 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms