RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 OLFM3Q96PB7 478 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 GRIP2Q9C0E4 1043 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 SNX25Q9H3E2 840 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 VRTNQ9H8Y1 702 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 USP3Q9Y6I4 520 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 CSPG5O95196 566 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ERCC2P18074 760 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 PIK3R1P27986 724 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 MAP3K7CLP57077 242 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ARHGAP1Q07960 439 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 CTBP1Q13363 440 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 FLOT2Q14254 428 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 GRM3Q14832 879 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 NRF1Q16656 503 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ARL13AQ5H913 290 aaPredicted RBP10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 STEAP4Q687X5 459 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 SPATA22Q8NHS9 363 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 KBTBD7Q8WVZ9 684 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 CENPKQ9BS16 269 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 NMRAL1Q9HBL8 299 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ETAA1Q9NY74 926 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 UBAP1Q9NZ09 502 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 FZD10Q9ULW2 581 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 H3BRB1 525 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 ZFXP17010 805 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 GRK2P25098 689 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 FDFT1P37268 417 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 NR2C2P49116 596 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 SOX4Q06945 474 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PDK1Q15118 436 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 CNGA3Q16281 694 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 LAYNQ6UX15 382 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 OTOP3Q7RTS5 596 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 TMC7Q7Z402 723 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PCDH20Q8N6Y1 951 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 BHLHE22Q8NFJ8 381 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 DCUN1D1Q96GG9 259 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 NDNQ99608 321 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 RBBP8Q99708 897 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 GORASP1Q9BQQ3 440 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 MED10Q9BTT4 135 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 GCOM2Q9BZD3 368 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 TUT1Q9H6E5 874 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 CYP4F12Q9HCS2 524 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 ZDHHC2Q9UIJ5 367 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PAPPA2Q9BXP8 1791 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 NRP1O14786 923 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 TSPAN8P19075 237 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 NFKB1P19838 968 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 DPP6P42658 865 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PTPN9P43378 593 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 GRIA4P48058 902 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PLK1P53350 603 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 BCAT1P54687 386 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 DEUP1Q05D60 604 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 ZBTB17Q13105 803 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 OTUD1Q5VV17 481 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 DENND6AQ8IWF6 608 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 DSELQ8IZU8 1212 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 ANKRD52Q8NB46 1076 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 VPS39Q96JC1 886 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 EPAS1Q99814 870 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 FTHL17Q9BXU8 183 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 DNAJC28Q9NX36 388 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 TRIM13O60858 407 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 RTN3O95197 1032 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 JCHAINP01591 159 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 HNRNPLP14866 589 aaKnown RBP eCLIP10.78□□□□□ -0.684e-12■■■□□ 19.2
PPP4R1-203ENST00000400556 PTPN3P26045 913 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 HOXA11P31270 313 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 SOX11P35716 441 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 MPP3Q13368 585 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 LAMB3Q13751 1172 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 POU6F1Q14863 301 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 ANKRD20A4Q4UJ75 823 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 C9orf57Q5W0N0 161 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 EPGNQ6UW88 154 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 KCNMB4Q86W47 210 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 SPATA24Q86W54 205 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 SLC41A1Q8IVJ1 513 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 RAB3IL1Q8TBN0 382 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 RNF217Q8TC41 542 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 PRPF18Q99633 342 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 BFARQ9NZS9 450 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 KIAA1257Q9ULG3 409 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 TLL2Q9Y6L7 1015 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 CNTFP26441 200 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 SPRP35270 261 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 MATKP42679 507 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 HARS2P49590 506 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 MTTPP55157 894 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 USP10Q14694 798 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 CYTH1Q15438 398 aa10.78□□□□□ -0.68
PPP4R1-203ENST00000400556 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms