RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 TAS2R38P59533 333 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 RTP5Q14D33 572 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 MEA1Q16626 185 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 HES3Q5TGS1 186 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 NAPEPLDQ6IQ20 393 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 FBXL22Q6P050 247 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 FOXR2Q6PJQ5 311 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 PRPF39Q86UA1 669 aaKnown RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 SPAG5Q96R06 1193 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 THAP9Q9H5L6 903 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 PRORYQ9H606 182 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 CAAP1Q9H8G2 361 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 TPX2Q9ULW0 747 aaKnown RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 OR51B4Q9Y5P0 310 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 RAI2Q9Y5P3 530 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 BPTFQ12830 3046 aa12.4□□□□□ -0.43
TFF3-202ENST00000398431 BECN2A8MW95 431 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 F5H5T6 163 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 PLRG1O43660 514 aaKnown RBP12.39□□□□□ -0.43
TFF3-202ENST00000398431 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
TFF3-202ENST00000398431 CKMT2P17540 419 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 MAT2AP31153 395 aaKnown RBP12.39□□□□□ -0.43
TFF3-202ENST00000398431 NNMTP40261 264 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
TFF3-202ENST00000398431 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 CETN1Q12798 172 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 CNTN1Q12860 1018 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 AGBL4Q5VU57 503 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 RNF219Q5W0B1 726 aaPredicted RBP12.39□□□□□ -0.43
TFF3-202ENST00000398431 KLHL10Q6JEL2 608 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 C14orf80Q86SX3 495 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 CACTIN-AS1Q8N1I8 211 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 PIP4K2CQ8TBX8 421 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 RFFLQ8WZ73 363 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 SLC2A13Q96QE2 648 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 MED15Q96RN5 788 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 FEM1AQ9BSK4 669 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 NRSN2Q9GZP1 204 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 INTS2Q9H0H0 1204 aaKnown RBP12.39□□□□□ -0.43
TFF3-202ENST00000398431 CA5BQ9Y2D0 317 aa12.39□□□□□ -0.43
TFF3-202ENST00000398431 A0A1B0GVM2 712 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 TCAF2A6NFQ2 919 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 RNF103O00237 685 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 TRIM38O00635 465 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 MCF2LO15068 1137 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 SLC7A4O43246 635 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 KRT5P13647 590 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 ABCG1P45844 678 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 STX17P56962 302 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 SEMG2Q02383 582 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 CENPCQ03188 943 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 PDCLQ13371 301 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 ILKQ13418 452 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 STIM1Q13586 685 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 AUHQ13825 339 aaKnown RBP12.38□□□□□ -0.43
TFF3-202ENST00000398431 MORC3Q14149 939 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 DLG2Q15700 870 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 C5orf22Q49AR2 442 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 SLC45A4Q5BKX6 768 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 GJB7Q6PEY0 223 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 TRIM69Q86WT6 500 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 OXR1Q8N573 874 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 NXPE2Q96DL1 559 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 CPXM1Q96SM3 734 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 TRIM62Q9BVG3 475 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 SRRTQ9BXP5 876 aaKnown RBP12.38□□□□□ -0.43
TFF3-202ENST00000398431 SLC12A6Q9UHW9 1150 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 DMTF1Q9Y222 760 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 PTPRQQ9UMZ3 2332 aa12.38□□□□□ -0.43
TFF3-202ENST00000398431 TDRD6O60522 2096 aaKnown RBP12.38□□□□□ -0.43
TFF3-202ENST00000398431 SMG1Q96Q15 3661 aaKnown RBP12.37□□□□□ -0.43
TFF3-202ENST00000398431 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
TFF3-202ENST00000398431 THAP12O43422 761 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 MED7O43513 233 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 SDC3O75056 442 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 C1QL1O75973 258 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 MT-CO1P00395 513 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 AFPP02771 609 aaKnown RBP12.37□□□□□ -0.43
TFF3-202ENST00000398431 PRB1P04280 392 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 GLI1P08151 1106 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 GIMD1P0DJR0 217 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 ACP1P24666 158 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 CCR1P32246 355 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 HNF1BP35680 557 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 PPP1R2P41236 205 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms