RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 UBXN6Q9BZV1 441 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 GBA2Q9HCG7 927 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 MCM8Q9UJA3 840 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 FAM50BQ9Y247 325 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 NDUFAF1Q9Y375 327 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 LTBP1Q14766 1721 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF536O15090 1300 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 A0A0A0MRY4 1105 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF839A8K0R7 811 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 PRRG1O14668 218 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CHADO15335 359 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 H2AFYO75367 372 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 DLGAP3O95886 979 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 LTFP02788 710 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 SOAT1P35610 550 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RPL14P50914 215 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 MFSD5Q6N075 450 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 LRRC8DQ7L1W4 858 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 LRRC39Q96DD0 335 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 NSMCE2Q96MF7 247 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 SPATA13Q96N96 652 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 PPP1R10Q96QC0 940 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 EBNA1BP2Q99848 306 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CDT1Q9H211 546 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 POMKQ9H5K3 350 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RIPK3Q9Y572 518 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 AK5Q9Y6K8 562 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 SH3BGRLO75368 114 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RECQL4O94761 1208 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ASS1P00966 412 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 MPOP05164 745 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ODC1P11926 461 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 HNRNPLP14866 589 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RPS12P25398 132 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 IL5RAQ01344 420 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 VAC14Q08AM6 782 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 PDK3Q15120 406 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TAF5Q15542 800 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 NEPROQ6NW34 567 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 SCIMPQ6UWF3 145 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 C10orf107Q8IVU9 208 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CCDC103Q8IW40 242 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RBM15BQ8NDT2 890 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CLEC4DQ8WXI8 215 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TLCD1Q96CP7 247 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TKTL2Q9H0I9 626 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CAB39LQ9H9S4 337 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RGS18Q9NS28 235 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 PRRC2BQ5JSZ5 2229 aaKnown RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ADGRA3Q8IWK6 1321 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 CBX4O00257 560 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ARHGEF9O43307 516 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PEX10O60683 326 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 HSMCR30P0CW71 290 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 COX4I1P13073 169 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 GRIA3P42263 894 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 NR2C2P49116 596 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 RUNX1T1Q06455 604 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 GRIK4Q16099 956 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ADRM1Q16186 407 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 SYTL3Q4VX76 610 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 CCDC92Q53HC0 331 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 DHDDSQ86SQ9 333 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 FNDC5Q8NAU1 212 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 DNERQ8NFT8 737 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 KCTD4Q8WVF5 259 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PIK3R5Q8WYR1 880 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 RCN3Q96D15 328 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 NDNQ99608 321 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 KCTD14Q9BQ13 255 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 TBCDQ9BTW9 1192 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ACE2Q9BYF1 805 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 TEKT2Q9UIF3 430 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 MYRFQ9Y2G1 1151 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 KAT6AQ92794 2004 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 FAM95CA0A1B0GW59 222 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 CD48P09326 243 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 SLC2A4P14672 509 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PSMB9P28065 219 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 LRPAP1P30533 357 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PTGIRP43119 386 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 SLC26A2P50443 739 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 CTBP1Q13363 440 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 LACTB2Q53H82 288 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 EFL1Q7Z2Z2 1120 aaKnown RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 SLC41A1Q8IVJ1 513 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 KBTBD2Q8IY47 623 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ATP6V0D2Q8N8Y2 350 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 BTBD7Q9P203 1132 aa10.94□□□□□ -0.66
CCDC40-204ENST00000397545 EIF3LQ9Y262 564 aaKnown RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PSMD12O00232 456 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-204ENST00000397545 PAPSS1O43252 624 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms