RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 BBS5Q8N3I7 341 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 FBXO25Q8TCJ0 367 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 MAML1Q92585 1016 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 USP13Q92995 863 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 RIPOR3Q96MK2 946 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 SLC39A8Q9C0K1 460 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 ACBD3Q9H3P7 528 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 VIPAS39Q9H9C1 493 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 IPO11Q9UI26 975 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 HPCAL4Q9UM19 191 aa19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 FARP1Q9Y4F1 1045 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-204ENST00000397404 NUP210Q8TEM1 1887 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 RNF103O00237 685 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 MAFKO60675 156 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 PPFIA2O75334 1257 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 TPSB2P20231 275 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 IFNAR2P48551 515 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 ITGA8P53708 1063 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 SERINC3Q13530 473 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 TRIP13Q15645 432 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 TPSAB1Q15661 275 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 RNASEH2BQ5TBB1 312 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 ZNF697Q5TEC3 545 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 RHBDF2Q6PJF5 856 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 ZCCHC9Q8N567 271 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 NECTIN4Q96NY8 510 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 MFHAS1Q9Y4C4 1052 aa19.47■□□□□ 0.71
TSPAN4-204ENST00000397404 NOTCH4Q99466 2003 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 GOLGA6L7A0A1B0GV03 622 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 CNTN5O94779 1100 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 CCNB1P14635 433 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 VAV1P15498 845 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 MTHFRP42898 656 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 PAPOLAP51003 745 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 GEMIN4P57678 1058 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 ZXDBP98169 803 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 GNA12Q03113 381 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 WASHC5Q12768 1159 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 SEMA5AQ13591 1074 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 PRPSAP1Q14558 356 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 COL19A1Q14993 1142 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 RARS2Q5T160 578 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 STXBP5Q5T5C0 1151 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 RFWD3Q6PCD5 774 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 ZDHHC24Q6UX98 284 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 TFAP2DQ7Z6R9 452 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 TDRD5Q8NAT2 981 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 MCUQ8NE86 351 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 CELF6Q96J87 481 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 TEKT5Q96M29 485 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 PRICKLE1Q96MT3 831 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 IGFLR1Q9H665 355 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 SP110Q9HB58 689 aa19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 KLHL8Q9P2G9 620 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-204ENST00000397404 NEBLO76041 1014 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 LUC7L3O95232 432 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 GLP2RO95838 553 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 RHOCP08134 193 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 GJA1P17302 382 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 CEBPBP17676 345 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 CES1P23141 567 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 PTPN3P26045 913 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 CTC1Q2NKJ3 1217 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 ARMC3Q5W041 872 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 ARID3BQ8IVW6 561 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 NAT8LQ8N9F0 302 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 ZSCAN18Q8TBC5 510 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 SMARCD2Q92925 531 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 IL12RB2Q99665 862 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 NOL6Q9H6R4 1146 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 RAB6BQ9NRW1 208 aa19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 AAR2Q9Y312 384 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-204ENST00000397404 CHD5Q8TDI0 1954 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 H0Y626 953 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 MAP3K6O95382 1288 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 MYBL2P10244 700 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 MLNP12872 115 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 HSPA9P38646 679 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 VPS41P49754 854 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 BASP1P80723 227 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 CDH18Q13634 790 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 TRMT10CQ7L0Y3 403 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 PID1Q7Z2X4 250 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 BBS7Q8IWZ6 715 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 PDIK1LQ8N165 341 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 GLIS1Q8NBF1 620 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 DDI1Q8WTU0 396 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 CPT1BQ92523 772 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 ARHGEF2Q92974 986 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 SLC2A11Q9BYW1 496 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 GBA3Q9H227 469 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 XAB2Q9HCS7 855 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 NDFIP2Q9NV92 336 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 MARK1Q9P0L2 795 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 TNRC18O15417 2968 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 LAMA3Q16787 3333 aa19.44■□□□□ 0.7
TSPAN4-204ENST00000397404 E7EVH7 732 aa19.43■□□□□ 0.7
TSPAN4-204ENST00000397404 RFXAPO00287 272 aa19.43■□□□□ 0.7
TSPAN4-204ENST00000397404 CACNG3O60359 315 aa19.43■□□□□ 0.7
TSPAN4-204ENST00000397404 PRAMEF11O60813 436 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms