RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TMEM57Q8N5G2 664 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 ARFGAP1Q8N6T3 406 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 TRIM63Q969Q1 353 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 SDCCAG3Q96C92 435 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 MSI2Q96DH6 328 aaKnown RBP4.56□□□□□ -1.68
CMC1-202ENST00000396610 RBM17Q96I25 401 aaKnown RBP4.56□□□□□ -1.68
CMC1-202ENST00000396610 FOXP1Q9H334 677 aaPredicted RBP4.56□□□□□ -1.68
CMC1-202ENST00000396610 ZNF304Q9HCX3 659 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 SPAG4Q9NPE6 437 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 RASSF1Q9NS23 344 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 ZBTB40Q9NUA8 1239 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 THAP1Q9NVV9 213 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 UPB1Q9UBR1 384 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 KLQ9UEF7 1012 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 DERAQ9Y315 318 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 DGKBQ9Y6T7 804 aa4.56□□□□□ -1.68
CMC1-202ENST00000396610 C17orf100A8MU93 164 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 SEPT4O43236 478 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 CHRNB1P11230 501 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 CYP4B1P13584 511 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 HOXB9P17482 250 aaPredicted RBP4.55□□□□□ -1.68
CMC1-202ENST00000396610 TNFRSF1BP20333 461 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 GSTM2P28161 218 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 PAPOLAP51003 745 aaKnown RBP4.55□□□□□ -1.68
CMC1-202ENST00000396610 OAZ1P54368 228 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 GAD2Q05329 585 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 PMPCAQ10713 525 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 LRCH2Q5VUJ6 765 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 HMBOX1Q6NT76 420 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 GALNT7Q86SF2 657 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 BRSK2Q8IWQ3 736 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 SCARB1Q8WTV0 552 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 COG8Q96MW5 612 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 SCLT1Q96NL6 688 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 SEMA4BQ9NPR2 832 aaPredicted RBP4.55□□□□□ -1.68
CMC1-202ENST00000396610 TLR8Q9NR97 1041 aaKnown RBP4.55□□□□□ -1.68
CMC1-202ENST00000396610 PCDHA12Q9UN75 941 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 DNAJC16Q9Y2G8 782 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 RRP7AQ9Y3A4 280 aaKnown RBP4.55□□□□□ -1.68
CMC1-202ENST00000396610 HS3ST3B1Q9Y662 390 aa4.55□□□□□ -1.68
CMC1-202ENST00000396610 PRPF4O43172 522 aaKnown RBP eCLIP4.54□□□□□ -1.68
CMC1-202ENST00000396610 EIF3JO75822 258 aaKnown RBP4.54□□□□□ -1.68
CMC1-202ENST00000396610 NDUFB8O95169 186 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 ARSAP15289 507 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 CHRNA5P30532 468 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 NR4A2P43354 598 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 ME1P48163 572 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 PPFIA1Q13136 1202 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 ODF3L2Q3SX64 289 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 ALG10Q5BKT4 473 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 ALG10BQ5I7T1 473 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 FBXO47Q5MNV8 452 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 ENTPD8Q5MY95 495 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 PIK3CD-AS1Q5SR53 167 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 TTC39AQ5SRH9 613 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 FAM171A1Q5VUB5 890 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 NUGGCQ68CJ6 796 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 KDELC2Q7Z4H8 507 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 GCC1Q96CN9 775 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 NAF1Q96HR8 494 aaKnown RBP4.54□□□□□ -1.68
CMC1-202ENST00000396610 PYM1Q9BRP8 204 aaKnown RBP4.54□□□□□ -1.68
CMC1-202ENST00000396610 WDR83Q9BRX9 315 aaKnown RBP4.54□□□□□ -1.68
CMC1-202ENST00000396610 TMEM79Q9BSE2 394 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 LUZP4Q9P127 313 aa4.54□□□□□ -1.68
CMC1-202ENST00000396610 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.54□□□□□ -1.68
CMC1-202ENST00000396610 TMEM272A0A1B0GTI8 110 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 CCNT1O60563 726 aaKnown RBP4.53□□□□□ -1.68
CMC1-202ENST00000396610 ATG13O75143 517 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 EPN2O95208 641 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 FGF2P09038 288 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 PSG1P11464 419 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 CYP2J2P51589 502 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 RPS6KA3P51812 740 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 C5orf22Q49AR2 442 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 CTXN3Q4LDR2 81 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 IRF2BP2Q7Z5L9 587 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 EXOC8Q8IYI6 725 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 MMP21Q8N119 569 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 MYRIPQ8NFW9 859 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 ZSCAN31Q96LW9 406 aaPredicted RBP4.53□□□□□ -1.68
CMC1-202ENST00000396610 FCRL4Q96PJ5 515 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 TWNKQ96RR1 684 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
CMC1-202ENST00000396610 ACTR5Q9H9F9 607 aaPredicted RBP4.53□□□□□ -1.68
CMC1-202ENST00000396610 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 EIF3FO00303 357 aaPredicted RBP4.52□□□□□ -1.69
CMC1-202ENST00000396610 METTL18O95568 372 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 CNPP09543 421 aaKnown RBP4.52□□□□□ -1.69
CMC1-202ENST00000396610 TMEM191BP0C7N4 346 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 KLRC2P26717 231 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 MVDP53602 400 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 SLC12A1Q13621 1099 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 AP5B1Q2VPB7 878 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 COLCA1Q6ZS62 124 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 GPSM1Q86YR5 675 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 ANKRD18AQ8IVF6 992 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 SLC25A41Q8N5S1 370 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 ANKRD44Q8N8A2 993 aa4.52□□□□□ -1.69
CMC1-202ENST00000396610 SCAIQ8N9R8 606 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms