RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 THAP2Q9H0W7 228 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 AVENQ9NQS1 362 aaPredicted RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 MAN1C1Q9NR34 630 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 PAQR5Q9NXK6 330 aaPredicted RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 DNM3Q9UQ16 869 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 POLHQ9Y253 713 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 CLDN25C9JDP6 229 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 PSTPIP1O43586 416 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 PSMB9P28065 219 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 SSTR1P30872 391 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 GTF2H1P32780 548 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 HSPA13P48723 471 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 POU6F2P78424 691 aaPredicted RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 PDK4Q16654 411 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 FGD3Q5JSP0 725 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 HHIPL2Q6UWX4 724 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 CPNE9Q8IYJ1 553 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 HACE1Q8IYU2 909 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 LRRC57Q8N9N7 239 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 FAM156AQ8NDB6 213 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 JADE3Q92613 823 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 SLC5A5Q92911 643 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 MKL1Q969V6 931 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 RUBCNLQ9H714 662 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 CLK4Q9HAZ1 481 aaKnown RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 POLR3BQ9NW08 1133 aaPredicted RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 SLC17A7Q9P2U7 560 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 TMEM59LQ9UK28 342 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 NENFQ9UMX5 172 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 RPL26L1Q9UNX3 145 aaKnown RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 DNAJC16Q9Y2G8 782 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 TIMM22Q9Y584 194 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 MYH11P35749 1972 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 E5RI56 91 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 MSH4O15457 936 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 AQP9O43315 295 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 KRT37O76014 449 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 ATF6P18850 670 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 GDI2P50395 445 aaKnown RBP8.59□□□□□ -1.04
NDE1-202ENST00000396355 PRKAA2P54646 552 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 PPP2R2BQ00005 443 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 POU5F1BQ06416 359 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 PTK7Q13308 1070 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 PHKG1Q16816 387 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 C2CD6Q53TS8 623 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 SLFN13Q68D06 897 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 Q6ZNX1 250 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 ARHGEF19Q8IW93 802 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 MINDY2Q8NBR6 621 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 PIK3R3Q92569 461 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 TUBGCP3Q96CW5 907 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 PRICKLE1Q96MT3 831 aaPredicted RBP8.59□□□□□ -1.04
NDE1-202ENST00000396355 YME1L1Q96TA2 773 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 UBE2TQ9NPD8 197 aaPredicted RBP8.59□□□□□ -1.04
NDE1-202ENST00000396355 QPCTLQ9NXS2 382 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 SENP1Q9P0U3 644 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 DNAJC12Q9UKB3 198 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 SPATA2Q9UM82 520 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 BTBD3Q9Y2F9 522 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 UGT2A1Q9Y4X1 527 aa8.59□□□□□ -1.04
NDE1-202ENST00000396355 PITPNM1O00562 1244 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 CD58P19256 250 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 KCNA5P22460 613 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 HTR2BP41595 481 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 MARCKSL1P49006 195 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ACTR3P61158 418 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 POU5F1Q01860 360 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 FAPQ12884 760 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ZMYND11Q15326 602 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 EPHA7Q15375 998 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 KNOP1Q1ED39 458 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 MTX3Q5HYI7 312 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
NDE1-202ENST00000396355 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 DUPD1Q68J44 220 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 UGT2A3Q6UWM9 527 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 NSUN6Q8TEA1 469 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 BRI3BPQ8WY22 251 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 SLC35C1Q96A29 364 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 CD274Q9NZQ7 290 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ADAMTS6Q9UKP5 1117 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 A0A1W2PRG6 482 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 F5H6K3 240 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 KATNA1O75449 491 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 PRKD3O94806 890 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 KLHL2O95198 593 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 VDRP11473 427 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 BMXP51813 675 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 MAPK12P53778 367 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 CLCQ05315 142 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 KLRC3Q07444 240 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 GNA13Q14344 377 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 DRAP1Q14919 205 aaPredicted RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 MROH9Q5TGP6 573 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 OSTM1Q86WC4 334 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ZC3H7AQ8IWR0 971 aaKnown RBP8.58□□□□□ -1.04
NDE1-202ENST00000396355 SLC30A5Q8TAD4 765 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 BRSK1Q8TDC3 778 aa8.58□□□□□ -1.04
NDE1-202ENST00000396355 ST8SIA2Q92186 375 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms