RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PTPRJQ12913 1337 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KCNU1A8MYU2 1149 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TCP11X1B4DZS4 312 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 DNAJC6O75061 913 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 JCHAINP01591 159 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CYP11A1P05108 521 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CHN1P15882 459 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GLUD2P49448 558 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MCCD1P59942 119 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RPL26P61254 145 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SOWAHAQ2M3V2 549 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ERAP2Q6P179 960 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FUT10Q6P4F1 479 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 USP45Q70EL2 814 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MOB2Q70IA6 237 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TTC30AQ86WT1 665 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TTC30BQ8N4P2 665 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CFAP61Q8NHU2 1237 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PLD4Q96BZ4 506 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 EBNA1BP2Q99848 306 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MRPL1Q9BYD6 325 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RXFP1Q9HBX9 757 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SLC25A13Q9UJS0 675 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NAALADL1Q9UQQ1 740 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RLFQ13129 1914 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ESPL1Q14674 2120 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RALGAPA1Q6GYQ0 2036 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 C9IYK1 514 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 VPS4BO75351 444 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MAP4P27816 1152 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NDUFV1P49821 464 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TUBP50607 506 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 DAOAP59103 153 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ATP6V0D1P61421 351 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 AP1S1P61966 158 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 AP2B1P63010 937 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 USP10Q14694 798 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SNCBQ16143 134 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SPDYAQ5MJ70 313 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 VARS2Q5ST30 1063 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TRIM67Q6ZTA4 783 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 EP400NLQ6ZTU2 488 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FIBCD1Q8N539 461 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 STAG3L4Q8TBR4 150 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PPWD1Q96BP3 646 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 LRIG1Q96JA1 1093 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MS4A4AQ96JQ5 239 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ATP13A3Q9H7F0 1226 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NMRK2Q9NPI5 230 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PCDHGB4Q9UN71 923 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CHMP2BQ9UQN3 213 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 LATS1O95835 1130 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MYL2P10916 166 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PYGBP11216 843 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ITGALP20701 1170 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SAT1P21673 171 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 EFEMP1Q12805 493 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GPR17Q13304 367 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GJC2Q5T442 439 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 EMC10Q5UCC4 262 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ADAMTSL2Q86TH1 951 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 XYLT1Q86Y38 959 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PDCD7Q8N8D1 485 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MAML1Q92585 1016 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TIFAQ96CG3 184 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CSPG4P5Q96PW8 444 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SLC25A51Q9H1U9 297 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PAPSS2O95340 614 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 AP2A1O95782 977 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 USP17L7P0C7H9 530 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CALB2P22676 271 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MLLT6P55198 1093 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PRKCZQ05513 592 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MAD2L1Q13257 205 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 HIC1Q14526 733 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TAF11Q15544 211 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 OLFML1Q6UWY5 402 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 APLFQ8IW19 511 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 AADATQ8N5Z0 425 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 APOPT1Q96IL0 206 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SH3GL2Q99962 352 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RHOJQ9H4E5 214 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RGS18Q9NS28 235 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ZFP69BQ9UJL9 534 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MYO1CO00159 1063 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 HAS3O00219 553 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TGDSO95455 350 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 IGSF6O95976 241 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 YBX3P16989 372 aaKnown RBP eCLIP3.45□□□□□ -1.866e-6■■■□□ 15.3
VPS13C-203ENST00000395896 CD151P48509 253 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CLCNKBP51801 687 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SEPT6Q14141 434 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 STXBP5Q5T5C0 1151 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FAM47EQ6ZV65 393 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KCNMB4Q86W47 210 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RASAL3Q86YV0 1011 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GDAP1Q8TB36 358 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ATG4AQ8WYN0 398 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PGAP3Q96FM1 320 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF514Q96K75 400 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms