RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.24■□□□□ 0.67
CBX1-202ENST00000393408 KLK14Q9P0G3 267 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 PLXNB2O15031 1838 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 CLDN5O00501 218 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 TRIM13O60858 407 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 ERCC2P18074 760 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 GLDCP23378 1020 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 ABCG1P45844 678 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 HSP90AA5PQ58FG0 334 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 TDRD5Q8NAT2 981 aaKnown RBP19.24■□□□□ 0.67
CBX1-202ENST00000393408 RNF169Q8NCN4 708 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 HIPK4Q8NE63 616 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 OSMRQ99650 979 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 MCMBPQ9BTE3 642 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 H3BNX3 289 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 H2AFYO75367 372 aaKnown RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 ZNF189O75820 626 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 C2P06681 752 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 MMP3P08254 477 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 PIM1P11309 404 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 UQCRBP14927 111 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 RAG1P15918 1043 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 AQP4P55087 323 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 HFE2Q6ZVN8 426 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 KBTBD6Q86V97 674 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 DNAAF3Q8N9W5 541 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 OPTNQ96CV9 577 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 MFSD3Q96ES6 412 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 OR52B2Q96RD2 323 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 GATA5Q9BWX5 397 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 NMRAL1Q9HBL8 299 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 GOLGA2P5Q9HBQ8 144 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 CASQ2O14958 399 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 HUS1O60921 280 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 LTFP02788 710 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 HOXD8P13378 290 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 NPR3P17342 541 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 CYP2B6P20813 491 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 ACAT1P24752 427 aaKnown RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 ADRA1BP35368 520 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 POLE2P56282 527 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 SOX4Q06945 474 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 PPIDQ08752 370 aaKnown RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 PAQR9Q6ZVX9 377 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 SLC7A14Q8TBB6 771 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 SREK1Q8WXA9 508 aaKnown RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 KCTD13Q8WZ19 329 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 KCNK16Q96T55 309 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 MLPHQ9BV36 600 aaPredicted RBP19.23■□□□□ 0.67
CBX1-202ENST00000393408 RAD54BQ9Y620 910 aa19.23■□□□□ 0.67
CBX1-202ENST00000393408 ZBTB24O43167 697 aaPredicted RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 TIMM44O43615 452 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 CD68P34810 354 aaPredicted RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 SERPINB6P35237 376 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 CSE1LP55060 971 aaKnown RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 SEMA3BQ13214 749 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 SV2CQ496J9 727 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 CERCAMQ5T4B2 595 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 PDZD4Q76G19 769 aaPredicted RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 ACVR1CQ8NER5 493 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 LENG8Q96PV6 779 aaPredicted RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 SLC9A7Q96T83 725 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 LRRC4Q9HBW1 653 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 TCF7L2Q9NQB0 619 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 ANLNQ9NQW6 1124 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 OXSMQ9NWU1 459 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 SSX2IPQ9Y2D8 614 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 TBC1D30Q9Y2I9 924 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 ZNF236Q9UL36 1845 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 ERI2A8K979 691 aaKnown RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 CLGNO14967 610 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 DARSP14868 501 aaKnown RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 KCNE1P15382 129 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 WARSP23381 471 aaKnown RBP19.22■□□□□ 0.67
CBX1-202ENST00000393408 YY1P25490 414 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 MPP3Q13368 585 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 MED21Q13503 144 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 TRIP10Q15642 601 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 KCNMB4Q86W47 210 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 SIX6OS1Q8N1H7 587 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 NTAN1Q96AB6 310 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 GBA3Q9H227 469 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 NRCAMQ92823 1304 aa19.22■□□□□ 0.67
CBX1-202ENST00000393408 I6L893 689 aaPredicted RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 FYNP06241 537 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 CSRP3P50461 194 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 XKR4Q5GH76 650 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 ARHGAP18Q8N392 663 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 NPWQ8N729 165 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 AGR3Q8TD06 166 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 VPS39Q96JC1 886 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 TRIM4Q9C037 500 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 ILKAPQ9H0C8 392 aaPredicted RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 RNF39Q9H2S5 420 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 WDR6Q9NNW5 1121 aaKnown RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 XPOTO43592 962 aaKnown RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 ATP9BO43861 1147 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 PEX1O43933 1283 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms