RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ESRRBO95718 433 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 JUNP05412 331 aaKnown RBP15.27■□□□□ 0.04
CTNS-202ENST00000381870 CRKP46108 304 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 RHDQ02161 417 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 RALGDSQ12967 914 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 SEPT6Q14141 434 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 TFDP2Q14188 446 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 TRIM25Q14258 630 aaKnown RBP15.27■□□□□ 0.04
CTNS-202ENST00000381870 INSCQ1MX18 579 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 HHIPL2Q6UWX4 724 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 XYLT1Q86Y38 959 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 ZNF420Q8TAQ5 688 aaPredicted RBP15.27■□□□□ 0.04
CTNS-202ENST00000381870 PPWD1Q96BP3 646 aaKnown RBP15.27■□□□□ 0.04
CTNS-202ENST00000381870 AGAP3Q96P47 875 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 SFMBT1Q9UHJ3 866 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 TCEAL9Q9UHQ7 104 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 HES2Q9Y543 173 aa15.27■□□□□ 0.04
CTNS-202ENST00000381870 E7ENX8 843 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 CLIC3O95833 236 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 POLR2BP30876 1174 aaKnown RBP15.27■□□□□ 0.03
CTNS-202ENST00000381870 EPHX2P34913 555 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 RCVRNP35243 200 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 MYL6P60660 151 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 PRKCQQ04759 706 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 TREML2Q5T2D2 321 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 GALNT18Q6P9A2 607 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 CPSF7Q8N684 471 aaKnown RBP15.27■□□□□ 0.03
CTNS-202ENST00000381870 ACDQ96AP0 544 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 POLR1BQ9H9Y6 1135 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 ZBTB26Q9HCK0 441 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.03
CTNS-202ENST00000381870 C1orf232A0A0U1RR37 186 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 SAC3D1A6NKF1 404 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 DLGAP1O14490 977 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 CLASP2O75122 1294 aaKnown RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 ALDH1A2O94788 518 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 ATG7O95352 703 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 PABPC1P11940 636 aaKnown RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 CD19P15391 556 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 BCAR1P56945 870 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 IRF9Q00978 393 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 ORC1Q13415 861 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 TRIM16LQ309B1 348 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 SEL1L3Q68CR1 1132 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 LPGAT1Q92604 370 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 APBA2Q99767 749 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 GATA5Q9BWX5 397 aaPredicted RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 TPK1Q9H3S4 243 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 SNX15Q9NRS6 342 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 FBXO28Q9NVF7 368 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 CROTQ9UKG9 612 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 PCDHGA7Q9Y5G6 932 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 UBIAD1Q9Y5Z9 338 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 ARID2Q68CP9 1835 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 GRID2O43424 1007 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 TADA2AO75478 443 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 ASS1P00966 412 aaKnown RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 PAX3P23760 479 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 IL4RP24394 825 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 GRIA3P42263 894 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 PSME3P61289 254 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 NFATC3Q12968 1075 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 RFTN1Q14699 578 aaPredicted RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 CDO1Q16878 200 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 C15orf59Q2T9L4 293 aaPredicted RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 CCDC153Q494R4 210 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 PRR5LQ6MZQ0 368 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 CES3Q6UWW8 571 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 IGFN1Q86VF2 1251 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 SIX6OS1Q8N1H7 587 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 TRUB1Q8WWH5 349 aaKnown RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 PGLYRP2Q96PD5 576 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 ILKAPQ9H0C8 392 aaPredicted RBP15.26■□□□□ 0.03
CTNS-202ENST00000381870 MUC3BQ9H195 1237 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 CCDC68Q9H2F9 335 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 PALMDQ9NP74 551 aa15.26■□□□□ 0.03
CTNS-202ENST00000381870 BCLAF3A2AJT9 711 aaKnown RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 KCNU1A8MYU2 1149 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 NFIBO00712 420 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 HDAC3O15379 428 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 ERVK-10P10266 1014 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 MLLT10P55197 1068 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 YWHAEP62258 255 aaKnown RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 EN1Q05925 392 aaPredicted RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 NEDD8Q15843 81 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 STEAP4Q687X5 459 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 PPP4R4Q6NUP7 873 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 NEPROQ6NW34 567 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 GK5Q6ZS86 529 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 CHST15Q7LFX5 561 aaPredicted RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 PCYOX1LQ8NBM8 494 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 SLC4A11Q8NBS3 891 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 CDKL2Q92772 493 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 MSTO1Q9BUK6 570 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 PDZD7Q9H5P4 517 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 VPS51Q9UID3 782 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 PTBP2Q9UKA9 531 aaKnown RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 COPG1Q9Y678 874 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms