RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ICAM3P32942 547 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RAP1GDS1P52306 607 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 JAG1P78504 1218 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RUNX3Q13761 415 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SLMAPQ14BN4 828 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 COBLL1Q53SF7 1204 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 KLC3Q6P597 504 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CRTC3Q6UUV7 619 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MON1AQ86VX9 555 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF280BQ86YH2 543 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 TMPRSS6Q8IU80 811 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SNIP1Q8TAD8 396 aaKnown RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 DDX1Q92499 740 aaKnown RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 LENG9Q96B70 501 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CNPY3Q9BT09 278 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 WRAP53Q9BUR4 548 aaKnown RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ADAM33Q9BZ11 813 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 PARVAQ9NVD7 372 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ETAA1Q9NY74 926 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ATRNL1Q5VV63 1379 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CCDC188H7C350 402 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SDC3O75056 442 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ACSL3O95573 720 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 LMNAP02545 664 aaKnown RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 PCCBP05166 539 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RENBPP51606 427 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 PPP2R2AP63151 447 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 GPC5P78333 572 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 QPCTQ16769 361 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 TSNAXIP1Q2TAA8 658 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 LY6G5CQ5SRR4 150 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MARC1Q5VT66 337 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ENPP7Q6UWV6 458 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MAMDC4Q6UXC1 1216 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ANO5Q75V66 913 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SCUBE3Q8IX30 993 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 GRK7Q8WTQ7 553 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 METTL21AQ8WXB1 218 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CAVIN3Q969G5 261 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 FGD4Q96M96 766 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 LPIN3Q9BQK8 851 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 PRRG4Q9BZD6 226 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RHBDL2Q9NX52 303 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SFMBT1Q9UHJ3 866 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SLC27A6Q9Y2P4 619 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF711Q9Y462 761 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CREBBPQ92793 2442 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CACNA1HO95180 2353 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ATP6V1G2O95670 118 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 C1RP00736 705 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CCNYL3P0C7X3 344 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ATF2P15336 505 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RGS4P49798 205 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RAD23BP54727 409 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SESN2P58004 480 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MTA1Q13330 715 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 LAMB3Q13751 1172 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MLF2Q15773 248 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF776Q68DI1 518 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RPLP0P6Q8NHW5 317 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 FGF13Q92913 245 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ACO2Q99798 780 aaKnown RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ISCUQ9H1K1 167 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 DLGAP2Q9P1A6 1054 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF212Q9UDV6 495 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 IP6K2Q9UHH9 426 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SH3BGRL2Q9UJC5 107 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 NUMBLQ9Y6R0 609 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CHURC1-FNTBB4DL54 471 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 TXNDC9O14530 226 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MUSKO15146 869 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF862O60290 1169 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 FTLP02792 175 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 NPR3P17342 541 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ACTR1BP42025 376 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 MSH2P43246 934 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 KCNJ1P48048 391 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 FNTBP49356 437 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ACTR1AP61163 376 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 AADACL2Q6P093 401 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SLFN11Q7Z7L1 901 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 TEX19Q8NA77 164 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SYN2Q92777 582 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CFAP36Q96G28 342 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 EDEM2Q9BV94 578 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 OSBPL6Q9BZF3 934 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 FOXQ1Q9C009 403 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 THAP2Q9H0W7 228 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 RNF39Q9H2S5 420 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ECT2Q9H8V3 914 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ABCB8Q9NUT2 735 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 PKD2L2Q9NZM6 624 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CASZ1Q86V15 1759 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CCDC189A1A4V9 331 aa6.67□□□□□ -1.34
NEDD9-202ENST00000379446 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
NEDD9-202ENST00000379446 DDX3XO00571 662 aaKnown RBP eCLIP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms