RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TMEM245Q9H330 911 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 NOL6Q9H6R4 1146 aaKnown RBP19.22■□□□□ 0.67
SSU72-203ENST00000378725 POLR3BQ9NW08 1133 aaPredicted RBP19.22■□□□□ 0.67
SSU72-203ENST00000378725 FBXO4Q9UKT5 387 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 ERVW-1Q9UQF0 538 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 STON1Q9Y6Q2 735 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 KMT2EQ8IZD2 1858 aa19.22■□□□□ 0.67
SSU72-203ENST00000378725 WASH3PC4AMC7 463 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 K7ESF4 209 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 DAPK3O43293 454 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 SPOPO43791 374 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 PTMAP06454 111 aaKnown RBP19.21■□□□□ 0.67
SSU72-203ENST00000378725 CD48P09326 243 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 CCDC175P0C221 793 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 HOXA6P31267 233 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 CTSOP43234 321 aaPredicted RBP19.21■□□□□ 0.67
SSU72-203ENST00000378725 NAP1L1P55209 391 aaKnown RBP19.21■□□□□ 0.67
SSU72-203ENST00000378725 YBEYP58557 167 aaPredicted RBP19.21■□□□□ 0.67
SSU72-203ENST00000378725 DPYSL3Q14195 570 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 KRT81Q14533 505 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 CRY1Q16526 586 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 IFI16Q16666 785 aaKnown RBP19.21■□□□□ 0.67
SSU72-203ENST00000378725 SDE2Q6IQ49 451 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 DAAM2Q86T65 1068 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 MAP7D3Q8IWC1 876 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 DCAF4L2Q8NA75 395 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 OR7D4Q8NG98 312 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 ARHGEF2Q92974 986 aaKnown RBP19.21■□□□□ 0.67
SSU72-203ENST00000378725 KLC2Q9H0B6 622 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 KCNF1Q9H3M0 494 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 GOLPH3Q9H4A6 298 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 CD248Q9HCU0 757 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 CACNA2D2Q9NY47 1150 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 VPS28Q9UK41 221 aa19.21■□□□□ 0.67
SSU72-203ENST00000378725 CXorf51AA0A1B0GTR3 108 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 A0A1W2PQF6 199 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 GRID2IPA4D2P6 1211 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 DCLK1O15075 740 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 PSTPIP1O43586 416 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 KRT86O43790 486 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 RAMP2O60895 175 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 ZMPSTE24O75844 475 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 TDGF1P13385 188 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 AMPD1P23109 780 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 KDELR1P24390 212 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 GJC1P36383 396 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 ETFBP38117 255 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 POLD3Q15054 466 aaPredicted RBP19.2■□□□□ 0.66
SSU72-203ENST00000378725 AFMIDQ63HM1 303 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 TMEM92Q6UXU6 159 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 VSIG1Q86XK7 387 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 CAMKK1Q8N5S9 505 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 KIAA1524Q8TCG1 905 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 RAPGEF5Q92565 580 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 FAF2Q96CS3 445 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 ZNF670Q9BS34 389 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 C2orf49Q9BVC5 232 aaPredicted RBP19.2■□□□□ 0.66
SSU72-203ENST00000378725 KCNH6Q9H252 994 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 LRRC19Q9H756 370 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 DDX56Q9NY93 547 aaKnown RBP19.2■□□□□ 0.66
SSU72-203ENST00000378725 SLC8A2Q9UPR5 921 aa19.2■□□□□ 0.66
SSU72-203ENST00000378725 MACROD2A1Z1Q3 448 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 C3orf70A6NLC5 250 aaPredicted RBP19.19■□□□□ 0.66
SSU72-203ENST00000378725 ZNF487B1APH4 448 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 ACVRL1P37023 503 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 WASP42768 502 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 DGKEP52429 567 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 NDST2P52849 883 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 CCDC173Q0VFZ6 552 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 MMRN1Q13201 1228 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 ANGPT1Q15389 498 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 PARP15Q460N3 678 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 LZTR1Q8N653 840 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 ZNF830Q96NB3 372 aaPredicted RBP19.19■□□□□ 0.66
SSU72-203ENST00000378725 SPON2Q9BUD6 331 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 ATP13A1Q9HD20 1204 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 KLHL11Q9NVR0 708 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 VPS51Q9UID3 782 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 SLCO3A1Q9UIG8 710 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 PPP2R2CQ9Y2T4 447 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 DOCK4Q8N1I0 1966 aa19.19■□□□□ 0.66
SSU72-203ENST00000378725 RASA4BC9J798 803 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 RASA4O43374 803 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 SNAP91O60641 907 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 HOXB2P14652 356 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 COL9A1P20849 921 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 PRKCHP24723 683 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 NUMBP49757 651 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 ST8SIA6P61647 398 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 CSTF1Q05048 431 aaKnown RBP19.18■□□□□ 0.66
SSU72-203ENST00000378725 SLC20A2Q08357 652 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 ZNF528Q3MIS6 628 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 FNDC3BQ53EP0 1204 aaKnown RBP19.18■□□□□ 0.66
SSU72-203ENST00000378725 ANKRD20A8PQ5CZ79 823 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 IL31Q6EBC2 164 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 SERPINA13PQ6UXR4 307 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 PCDH19Q8TAB3 1148 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 NELL1Q92832 810 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 RPL10LQ96L21 214 aaKnown RBP19.18■□□□□ 0.66
SSU72-203ENST00000378725 SLC39A8Q9C0K1 460 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms