RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MLPHQ9BV36 600 aaPredicted RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 INO80BQ9C086 356 aaPredicted RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 SENP6Q9GZR1 1112 aaPredicted RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 TMEM253P0C7T8 217 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 GP5P40197 560 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 SMARCB1Q12824 385 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 PLEKHG6Q3KR16 790 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 C10orf62Q5T681 223 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-202ENST00000378161 NANOGP8Q6NSW7 305 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 HAUS6Q7Z4H7 955 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 C11orf96Q7Z7L8 435 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 TBC1D19Q8N5T2 526 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 VGLL2Q8N8G2 317 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 SIMC1Q8NDZ2 872 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 ART4Q93070 314 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 TBCBQ99426 244 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 AGPAT1Q99943 283 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 EIF2AK1Q9BQI3 630 aaKnown RBP11.98□□□□□ -0.49
NPHP4-202ENST00000378161 HPS4Q9NQG7 708 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 ADAMTS6Q9UKP5 1117 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 BAG5Q9UL15 447 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 CDC14AQ9UNH5 594 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 A0A0A6YYK5 440 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-202ENST00000378161 TOR1BO14657 336 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 AP1G1O43747 822 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 CCDC60Q8IWA6 550 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-202ENST00000378161 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 NUAK2Q9H093 628 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 APEX2Q9UBZ4 518 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 TBX1O43435 398 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 TGDSO95455 350 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 CCNE2O96020 404 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 SERPINA6P08185 405 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 UQCRC1P31930 480 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 NUDT1P36639 197 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 HPCAL1P37235 193 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 PPP4CP60510 307 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 PFKPQ01813 784 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 PADI6Q6TGC4 694 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 ZNF366Q8N895 744 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 SNX19Q92543 992 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 ATP6V1E2Q96A05 226 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 MROQ9BYG7 248 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 NTN4Q9HB63 628 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 KLF15Q9UIH9 416 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 PCDHGC3Q9UN70 934 aa11.98□□□□□ -0.49
NPHP4-202ENST00000378161 GNGT2O14610 69 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 MAGEB2O15479 319 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 TBC1D4O60343 1298 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 TPST1O60507 370 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PDE9AO76083 593 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 RAP1GAPP47736 663 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 B2MP61769 119 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SLC1A5Q15758 541 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 DENND5AQ6IQ26 1287 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 METTL25Q8N6Q8 603 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SLC9A6Q92581 669 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 REEP2Q9BRK0 252 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SUCOQ9UBS9 1254 aaKnown RBP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PTBP2Q9UKA9 531 aaKnown RBP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 MYH7BA7E2Y1 1941 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 HDAC3O15379 428 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 CLDN3O15551 220 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 FMO5P49326 533 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PEX3P56589 373 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 GPS1Q13098 491 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 KIZQ2M2Z5 673 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PDPK2PQ6A1A2 396 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 TTBK2Q6IQ55 1244 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 DNAJC24Q6P3W2 148 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 KIAA0408Q6ZU52 694 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 EFL1Q7Z2Z2 1120 aaKnown RBP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 FAM160B2Q86V87 743 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SNX18Q96RF0 628 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 MBD2Q9UBB5 411 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 LGALS13Q9UHV8 139 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 TESMINQ9Y4I5 508 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 F5H6K3 240 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 ECHS1P30084 290 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SERPINB5P36952 375 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 CYP4F2P78329 520 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PCDH1Q08174 1060 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 CYP4F3Q08477 520 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 EFR3AQ14156 821 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 HIF1AQ16665 826 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 ALKBH2Q6NS38 261 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 ADGRA1Q86SQ6 560 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 ZC3H7AQ8IWR0 971 aaKnown RBP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 RASGEF1CQ8N431 466 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms