RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SH3GLB1Q9Y371 365 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 DCTN3O75935 186 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 PENKP01210 267 aaPredicted RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 PSMB4P28070 264 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 EPHB2P29323 1055 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 GRIK1P39086 918 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 FAM189BP81408 668 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 KLC1Q07866 573 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 GALNT2Q10471 571 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 PRPSAP1Q14558 356 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TIFABQ6ZNK6 161 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TAC4Q86UU9 113 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 CCDC33Q8N5R6 958 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TMCO5AQ8N6Q1 288 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 OR10T2Q8NGX3 314 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 DQX1Q8TE96 717 aaKnown RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 FUBP3Q96I24 572 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBR4-202ENST00000375224 ANKRD27Q96NW4 1050 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 PPP1R2P1Q96PQ5 205 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 SH3GL1Q99961 368 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 OSBPL10Q9BXB5 764 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 MANSC1Q9H8J5 431 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TRPV5Q9NQA5 729 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 MAGEB16A2A368 324 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 FAM72CH0Y354 149 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 GOLGA8RI6L899 631 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 FGF10O15520 208 aaPredicted RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 ATP5HO75947 161 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 POLBP06746 335 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 MYCLP1P12525 358 aaPredicted RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 ADRA1DP25100 572 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 PTPN3P26045 913 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 ARHGEF6Q15052 776 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 FAM72AQ5TYM5 149 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 FAM72DQ6L9T8 149 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SH2D5Q6ZV89 423 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 MARK2Q7KZI7 788 aaKnown RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 FAM72BQ86X60 149 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 ACMSDQ8TDX5 336 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 HASPINQ8TF76 798 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SERAC1Q96JX3 654 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 CATSPERBQ9H7T0 1116 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 TMLHEQ9NVH6 421 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 ARHGEF38Q9NXL2 777 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 BFARQ9NZS9 450 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 N6AMT1Q9Y5N5 214 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 THSD7BQ9C0I4 1608 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 PTPRDP23468 1912 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 COL4A4P53420 1690 aaPredicted RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 TMEM221A6NGB7 291 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SYN3O14994 580 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 NDUFB5O43674 189 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 OAZ2O95190 189 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 AP2A1O95782 977 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 IGLV3-25P01717 112 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 DHRS4L1P0CG22 281 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 CCR1P32246 355 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 CCNFP41002 786 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 GARSP41250 739 aaKnown RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 RABGGTBP53611 331 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 DSC1Q08554 894 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 MAP7Q14244 749 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 AGAP11Q8TF27 550 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 RHOBTB2Q9BYZ6 727 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 LRRC40Q9H9A6 602 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 ABCF3Q9NUQ8 709 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 DLGAP2Q9P1A6 1054 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 PRELID1Q9Y255 219 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 PATJQ8NI35 1801 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 WDR27A2RRH5 827 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 CXorf49A8MYA2 514 aaPredicted RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 IRAK2O43187 625 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 LRIG2O94898 1065 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 IL1BP01584 269 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SKIV2L2P42285 1042 aaKnown RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 NPY2RP49146 381 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SESN2P58004 480 aaPredicted RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 RIPK1Q13546 671 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 FRG1Q14331 258 aaKnown RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 PPP2R5DQ14738 602 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 GALNTL6Q49A17 601 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 TEX44Q53QW1 395 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 CGB2Q6NT52 195 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 MPP5Q8N3R9 675 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SLC43A3Q8NBI5 491 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 USP33Q8TEY7 942 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SNRNP27Q8WVK2 155 aaKnown RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 ABHD8Q96I13 439 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 HIC2Q96JB3 615 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 KLF6Q99612 283 aaPredicted RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 GBA3Q9H227 469 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 SMOC2Q9H3U7 446 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 FBXO44Q9H4M3 255 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 CROTQ9UKG9 612 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 GRID1Q9ULK0 1009 aa8.39□□□□□ -1.07
UBR4-202ENST00000375224 MYO18AQ92614 2054 aaKnown RBP8.39□□□□□ -1.07
UBR4-202ENST00000375224 TRIM43BA6NCK2 446 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms