RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PIGVQ9NUD9 493 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 ARMCX1Q9P291 453 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 DNAJB4Q9UDY4 337 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 FBXW11Q9UKB1 542 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 APOBEC2Q9Y235 224 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 DNAJC16Q9Y2G8 782 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 RPS6KL1Q9Y6S9 549 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TMEM114B3SHH9 223 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 ADAMTS4O75173 837 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 GSRP00390 522 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 APOA4P06727 396 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 COL6A1P12109 1028 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 TYK2P29597 1187 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 LIMK2P53671 638 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 RPL10AP62906 217 aaKnown RBP14.25□□□□□ -0.13
HMGCL-203ENST00000374490 ZNF33AQ06730 810 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 PCLAFQ15004 111 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 MUM1Q2TAK8 710 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 ACSBG2Q5FVE4 666 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 WSCD1Q658N2 575 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 LHX8Q68G74 356 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 TWF2Q6IBS0 349 aaKnown RBP14.25□□□□□ -0.13
HMGCL-203ENST00000374490 FAM35AQ86V20 835 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 TREML1Q86YW5 311 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 SCUBE1Q8IWY4 988 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 PCSK9Q8NBP7 692 aaKnown RBP14.25□□□□□ -0.13
HMGCL-203ENST00000374490 IRGQQ8WZA9 623 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 EPAS1Q99814 870 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 GPAMQ9HCL2 828 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
HMGCL-203ENST00000374490 COPG2Q9UBF2 871 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 CDH9Q9ULB4 789 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 VANGL2Q9ULK5 521 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 PLA2G4CQ9UP65 541 aa14.25□□□□□ -0.13
HMGCL-203ENST00000374490 SYNJ2BP-COX16A0A087WUM0 186 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 CLDN5O00501 218 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 PTGESO14684 152 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 TIMM44O43615 452 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 AP1G2O75843 785 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 RPLP2P05387 115 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 KITP10721 976 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 SKIP12755 728 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 HARS2P49590 506 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 PRKAA2P54646 552 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 ALDH18A1P54886 795 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 MAP3K7CLP57077 242 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 ABCE1P61221 599 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 CRADDP78560 199 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 MRPS35P82673 323 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 GALNT2Q10471 571 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 PRPSAP1Q14558 356 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 RAB41Q5JT25 222 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 SYPL2Q5VXT5 272 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 BSPRYQ5W0U4 402 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 TMEM135Q86UB9 458 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 LCA5Q86VQ0 697 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 SCML4Q8N228 414 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 NDRG1Q92597 394 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 ZNF669Q96BR6 464 aaPredicted RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 SENP8Q96LD8 212 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 FAM161BQ96MY7 647 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 WDR6Q9NNW5 1121 aaKnown RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 SNX15Q9NRS6 342 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 COX16Q9P0S2 106 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 MARCOQ9UEW3 520 aaPredicted RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 CORO1CQ9ULV4 474 aaPredicted RBP14.24□□□□□ -0.13
HMGCL-203ENST00000374490 SZT2Q5T011 3432 aa14.24□□□□□ -0.13
HMGCL-203ENST00000374490 KRT36O76013 467 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 BEST1O76090 585 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 LTFP02788 710 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ASGR1P07306 291 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RALBP11234 206 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CPA3P15088 417 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PAX3P23760 479 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ACAT1P24752 427 aaKnown RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DNAJB1P25685 340 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CST5P28325 142 aaPredicted RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PCSK1P29120 753 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PRDX6P30041 224 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CYP2C18P33260 490 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 HK2P52789 917 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 IRX4P78413 519 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 MRPS6P82932 125 aaKnown RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 MXRA7P84157 204 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RCN2Q14257 317 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RABGAP1LQ5R372 815 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 FAM182AQ5T1J6 154 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 SNX30Q5VWJ9 437 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 KCTD11Q693B1 232 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 C16orf46Q6P387 395 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 LRRC74BQ6ZQY2 392 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ZCCHC23Q6ZST2 131 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 UNC5BQ8IZJ1 945 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DEFB123Q8N688 67 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ARRDC4Q8NCT1 418 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RBM15BQ8NDT2 890 aaKnown RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 OR52K1Q8NGK4 314 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PPP1R2P1Q96PQ5 205 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms