RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CD248Q9HCU0 757 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 COL4A6Q14031 1691 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CYP11A1P05108 521 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 SKIP12755 728 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 PTPN3P26045 913 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 TARSP26639 723 aaKnown RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CRHR1P34998 444 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CCNFP41002 786 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 RASSF2P50749 326 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ARFIP2P53365 341 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 TMPRSS15P98073 1019 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 TSPY1Q01534 308 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 PPIDQ08752 370 aaKnown RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 TAF1BQ53T94 588 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ICE2Q659A1 982 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ATG16L1Q676U5 607 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 PM20D1Q6GTS8 502 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 NUDCD3Q8IVD9 361 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ARNTL2Q8WYA1 636 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 RSPH1Q8WYR4 309 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 RAB3IPQ96QF0 476 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 YME1L1Q96TA2 773 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 RGS18Q9NS28 235 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 SYBUQ9NX95 663 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 RPS6KL1Q9Y6S9 549 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ARHGEF37A1IGU5 675 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 HMX2A2RU54 273 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 KLF11O14901 512 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 TGDSO95455 350 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 KRT16P08779 473 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 PAX3P23760 479 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 HTRA4P83105 476 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 ZBTB16Q05516 673 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 RWDD4Q6NW29 188 aaKnown RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 ZNF449Q6P9G9 518 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 MARK2Q7KZI7 788 aaKnown RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 BHLHA9Q7RTU4 235 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 NPWQ8N729 165 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 OR52K1Q8NGK4 314 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 ATP2A3Q93084 1043 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 UROC1Q96N76 676 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 RAD9AQ99638 391 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 MECRQ9BV79 373 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 NOD2Q9HC29 1040 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 TMLHEQ9NVH6 421 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 MKS1Q9NXB0 559 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 BFARQ9NZS9 450 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 TRHDEQ9UKU6 1024 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 MTO1Q9Y2Z2 717 aaKnown RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 SNX10Q9Y5X0 201 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 M0QZQ0 153 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 USP12O75317 370 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 LRIG2O94898 1065 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 CSPG5O95196 566 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 GARSP41250 739 aaKnown RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 PDE1BQ01064 536 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 ADGRE1Q14246 886 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 RAB30Q15771 203 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 ITPRIPL1Q6GPH6 555 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 DCLRE1AQ6PJP8 1040 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 CES3Q6UWW8 571 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 TIFABQ6ZNK6 161 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 TAC4Q86UU9 113 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 RASSF3Q86WH2 238 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 CEP57Q86XR8 500 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 SPATA2LQ8IUW3 424 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-202ENST00000374487 OR10T2Q8NGX3 314 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 TMEM209Q96SK2 561 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 SIK2Q9H0K1 926 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 HEY2Q9UBP5 337 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 VANGL2Q9ULK5 521 aa12.36□□□□□ -0.43
HMGCL-202ENST00000374487 XIRP2A4UGR9 3374 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 EFCAB14O75071 495 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 AP2A1O95782 977 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SLC8A1P32418 973 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 GRIK1P39086 918 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 NIPAL4Q0D2K0 466 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 GALNT2Q10471 571 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 NAB1Q13506 487 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 RIPK1Q13546 671 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 CHI3L2Q15782 390 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SMAD1Q15797 465 aaKnown RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 TEX44Q53QW1 395 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SPANXN3Q5MJ09 141 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SLC24A5Q71RS6 500 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 CLNKQ7Z7G1 428 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 STKLD1Q8NE28 680 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SCAMP5Q8TAC9 235 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms