RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SMARCAD1Q9H4L7 1026 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SMOXQ9NWM0 555 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SLC9A2Q9UBY0 812 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 ST14Q9Y5Y6 855 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CROCCQ5TZA2 2017 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 KRT75O95678 551 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 AMHP03971 560 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 ALDOAP04075 364 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 EPHX2P34913 555 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 HPCAL1P37235 193 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TMBIM6P55061 237 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 IFITM2Q01629 132 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 ROR1Q01973 937 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 PTK2BQ14289 1009 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 DGKDQ16760 1214 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 FAM182AQ5T1J6 154 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 BTLAQ7Z6A9 289 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TUBA1CQ9BQE3 449 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 C20orf96Q9NUD7 363 aaPredicted RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 PCDHB4Q9Y5E5 795 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 ZNF839A8K0R7 811 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TPP1O14773 563 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 SLC22A2O15244 555 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 HSPA4LO95757 839 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 HSPA8P11142 646 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 NR4A1P22736 598 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 MZF1P28698 734 aaPredicted RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TPTEP56180 551 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 NME5P56597 212 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 ADAM17P78536 824 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 PRKCQQ04759 706 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TRIM25Q14258 630 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 RFX6Q8HWS3 928 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 ANKFN1Q8N957 763 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 LILRB4Q8NHJ6 448 aa13.16□□□□□ -0.3
PRPF4-201ENST00000374198 TMA16Q96EY4 203 aaKnown RBP13.16□□□□□ -0.3
PRPF4-201ENST00000374198 CLDN25C9JDP6 229 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 TADA2AO75478 443 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 CALB1P05937 261 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 KRT7P08729 469 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 MATN1P21941 496 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 IL1R2P27930 398 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 SLC7A1P30825 629 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 OPRL1P41146 370 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 MAPK10P53779 464 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 MFSD2AQ8NA29 543 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 LRRC39Q96DD0 335 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 IMPG2Q9BZV3 1241 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 PCDHAC1Q9H158 963 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 WDR55Q9H6Y2 383 aaPredicted RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 ADA2Q9NZK5 511 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 SUCOQ9UBS9 1254 aaKnown RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 PSMD11O00231 422 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 DLGAP1O14490 977 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 ATP6V0D1P61421 351 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 HERC3Q15034 1050 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 NEDD8Q15843 81 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 USP43Q70EL4 1123 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 RAVER1Q8IY67 606 aaKnown RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 CALML6Q8TD86 181 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 TOP1MTQ969P6 601 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 FBXL18Q96ME1 805 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 TMEM216Q9P0N5 145 aa13.15□□□□□ -0.3
PRPF4-201ENST00000374198 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 CNOT6Q9ULM6 557 aaKnown RBP13.15□□□□□ -0.3
PRPF4-201ENST00000374198 WDR64B1ANS9 1081 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 MSI1O43347 362 aaKnown RBP13.15□□□□□ -0.31
PRPF4-201ENST00000374198 TAP1Q03518 808 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 PICALMQ13492 652 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 TDRD5Q8NAT2 981 aaKnown RBP13.15□□□□□ -0.31
PRPF4-201ENST00000374198 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 OR13F1Q8NGS4 319 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 AGR3Q8TD06 166 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 SLC7A3Q8WY07 619 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.31
PRPF4-201ENST00000374198 DUS3LQ96G46 650 aaKnown RBP13.15□□□□□ -0.31
PRPF4-201ENST00000374198 SH3YL1Q96HL8 342 aaPredicted RBP13.15□□□□□ -0.31
PRPF4-201ENST00000374198 MTG1Q9BT17 334 aaPredicted RBP13.15□□□□□ -0.31
PRPF4-201ENST00000374198 EFHD1Q9BUP0 239 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 ADI1Q9BV57 179 aa13.15□□□□□ -0.31
PRPF4-201ENST00000374198 PAK5Q9P286 719 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms