RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ZNF783Q6ZMS7 281 aa20.56■□□□□ 0.88
TMEM53-205ENST00000372244 TFAP2DQ7Z6R9 452 aa20.56■□□□□ 0.88
TMEM53-205ENST00000372244 SLFN11Q7Z7L1 901 aa20.56■□□□□ 0.88
TMEM53-205ENST00000372244 TOE1Q96GM8 510 aaKnown RBP20.56■□□□□ 0.88
TMEM53-205ENST00000372244 PSMB7Q99436 277 aa20.56■□□□□ 0.88
TMEM53-205ENST00000372244 VPS28Q9UK41 221 aa20.56■□□□□ 0.88
TMEM53-205ENST00000372244 NEU3Q9UQ49 428 aa20.56■□□□□ 0.88
TMEM53-205ENST00000372244 A0A0D9SEW6 157 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 ATMINO43313 823 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-205ENST00000372244 ATP9BO43861 1147 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 LRIG2O94898 1065 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 MYBL1P10243 752 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 ACADMP11310 421 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 NNMTP40261 264 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 NUMBP49757 651 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 AIF1P55008 147 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 ZNF33AQ06730 810 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 SF3A2Q15428 464 aaKnown RBP20.55■□□□□ 0.88
TMEM53-205ENST00000372244 TMC6Q7Z403 805 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 NLRP14Q86W24 1093 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 SLC41A1Q8IVJ1 513 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 VSTM4Q8IW00 320 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 ARFGAP1Q8N6T3 406 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 FNIP1Q8TF40 1166 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 MUC3BQ9H195 1237 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 TMEM74BQ9NUR3 256 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 ARHGAP20Q9P2F6 1191 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 CNOT8Q9UFF9 292 aaKnown RBP20.55■□□□□ 0.88
TMEM53-205ENST00000372244 PILRBQ9UKJ0 227 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 HS3ST2Q9Y278 367 aa20.55■□□□□ 0.88
TMEM53-205ENST00000372244 A0A087X0T9 212 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 RHOCP08134 193 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 FAM228BP0C875 321 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 L1CAMP32004 1257 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 TDRD12Q587J7 1177 aaKnown RBP20.54■□□□□ 0.88
TMEM53-205ENST00000372244 PEAR1Q5VY43 1037 aaPredicted RBP20.54■□□□□ 0.88
TMEM53-205ENST00000372244 LYSMD4Q5XG99 296 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 SCYL2Q6P3W7 929 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 CYP2U1Q7Z449 544 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 VPS36Q86VN1 386 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 SYT12Q8IV01 421 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 DEFB119Q8N690 84 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 CADM4Q8NFZ8 388 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 RMDN1Q96DB5 314 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 TRIM11Q96F44 468 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 DNAJC7Q99615 494 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.54■□□□□ 0.88
TMEM53-205ENST00000372244 C2orf49Q9BVC5 232 aaPredicted RBP20.54■□□□□ 0.88
TMEM53-205ENST00000372244 TRIM7Q9C029 511 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 SMOC1Q9H4F8 434 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 DLL3Q9NYJ7 618 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 FZD10Q9ULW2 581 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 DOCK4Q8N1I0 1966 aa20.54■□□□□ 0.88
TMEM53-205ENST00000372244 NDUFS2O75306 463 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 MT-CO1P00395 513 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 RHOQP17081 205 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 ITPKAP23677 461 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 HOXD12P35452 270 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 KRT83P78385 493 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 ZNF252P-AS1Q0IIN9 211 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 ZNF776Q68DI1 518 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-205ENST00000372244 PYROXD2Q8N2H3 581 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 SH2D3CQ8N5H7 860 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 DCAF4L2Q8NA75 395 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 OR8K1Q8NGG5 319 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 PIGKQ92643 395 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 FOXJ1Q92949 421 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 VPS51Q9UID3 782 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 SCML1Q9UN30 329 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 LAMA1P25391 3075 aa20.53■□□□□ 0.88
TMEM53-205ENST00000372244 GDF9O60383 454 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 SNAP91O60641 907 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 ZMPSTE24O75844 475 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 VAV1P15498 845 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 PSMA2P25787 234 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 DPP6P42658 865 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 SEMA3BQ13214 749 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 TRIM14Q14142 442 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 DLG2Q15700 870 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 RSPO4Q2I0M5 234 aaPredicted RBP20.52■□□□□ 0.88
TMEM53-205ENST00000372244 ARMCX6Q7L4S7 300 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 ZNF653Q96CK0 615 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 MRPL47Q9HD33 250 aaKnown RBP20.52■□□□□ 0.88
TMEM53-205ENST00000372244 RXFP3Q9NSD7 469 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 NDFIP2Q9NV92 336 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 TMEM248Q9NWD8 314 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 SLC25A13Q9UJS0 675 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 NENFQ9UMX5 172 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 SCINQ9Y6U3 715 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 NUP205Q92621 2012 aa20.52■□□□□ 0.88
TMEM53-205ENST00000372244 RNASEH1O60930 286 aaKnown RBP20.51■□□□□ 0.87
TMEM53-205ENST00000372244 DNTTP04053 509 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 DESP17661 470 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 SDHBP21912 280 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 ID4P47928 161 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 MAPKAPK2P49137 400 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 GNA12Q03113 381 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 ELAVL3Q14576 367 aaKnown RBP20.51■□□□□ 0.87
TMEM53-205ENST00000372244 EFHC2Q5JST6 749 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 RWDD4Q6NW29 188 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms