RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CCNYL2Q5T2Q4 361 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ZNF571Q7Z3V5 609 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 GPR180Q86V85 440 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 CADM2Q8N3J6 435 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 RASGEF1CQ8N431 466 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 SLC4A11Q8NBS3 891 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 CDADC1Q9BWV3 514 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 PPA2Q9H2U2 334 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 KANSL2Q9H9L4 492 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 OSGEPQ9NPF4 335 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ZNF222Q9UK12 451 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 SNX7Q9UNH6 387 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 PXDNLA1KZ92 1463 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 COL3A1P02461 1466 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 RAB19A4D1S5 217 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ARHGEF33A8MVX0 844 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 PLK4O00444 970 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 POLR1CO15160 346 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 SLC22A1O15245 554 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 IL7P13232 177 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 OSBPP22059 807 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 UQCRC1P31930 480 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 CHRNB3Q05901 458 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 COASYQ13057 564 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ALX1Q15699 326 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 MROH9Q5TGP6 573 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 PRMT9Q6P2P2 845 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 BHLHB9Q6PI77 547 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ZNF517Q6ZMY9 492 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 OTOP3Q7RTS5 596 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 SGMS1Q86VZ5 419 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ERO1BQ86YB8 467 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 C12orf50Q8NA57 414 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ANGPTL6Q8NI99 470 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 SLC9A6Q92581 669 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 UTP4Q969X6 686 aaKnown RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 ZC3H10Q96K80 434 aaKnown RBP10.6□□□□□ -0.71
PRDM1-201ENST00000369089 RTKNQ9BST9 563 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 TMEM121Q9BTD3 319 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 TMLHEQ9NVH6 421 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 HSPB11Q9Y547 144 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 PCDHB2Q9Y5E7 798 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 CEPT1Q9Y6K0 416 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 V9GYQ6 96 aa10.6□□□□□ -0.71
PRDM1-201ENST00000369089 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 A8MU76 341 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 CSF1RP07333 972 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 BMXP51813 675 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 TMBIM6P55061 237 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 PTK6Q13882 451 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 RALGPS2Q86X27 583 aaPredicted RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 CCDC36Q8IYA8 594 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 SIMC1Q8NDZ2 872 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 TCEAL3Q969E4 200 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 PHOX2BQ99453 314 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 TTYH1Q9H313 450 aaPredicted RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 CD274Q9NZQ7 290 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 EBF1Q9UH73 591 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 POLIQ9UNA4 740 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 EMSYQ7Z589 1322 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 E2F3O00716 465 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 SLC9A1P19634 815 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 MATN1P21941 496 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 GUCY1A2P33402 732 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 HNF1BP35680 557 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 CACNB1Q02641 598 aaPredicted RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 VWA5B1Q5TIE3 1220 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 RNF135Q8IUD6 432 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 FBXO36Q8NEA4 188 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 C1QTNF1Q9BXJ1 281 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 MTMR12Q9C0I1 747 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 THAP2Q9H0W7 228 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 CPQQ9Y646 472 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 GSG1L2A8MUP6 293 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 SLCO1B7G3V0H7 640 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 FAM20BO75063 409 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 ZMPSTE24O75844 475 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 OAS1P00973 400 aaKnown RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 ADRA2BP18089 450 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 CBX5P45973 191 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 RFX5P48382 616 aaPredicted RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 TBRG1Q3YBR2 411 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 MTX3Q5HYI7 312 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 ZC3H12BQ5HYM0 836 aaKnown RBP10.59□□□□□ -0.71
PRDM1-201ENST00000369089 C11orf63Q6NUN7 778 aa10.59□□□□□ -0.71
PRDM1-201ENST00000369089 ANGPTL8Q6UXH0 198 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms