RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ZDHHC7Q9NXF8 308 aa19.9■□□□□ 0.78
CHTOP-204ENST00000368694 RASA4BC9J798 803 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 AGPSO00116 658 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 RIPK2O43353 540 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 RASA4O43374 803 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 ACSL3O95573 720 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 JCHAINP01591 159 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 PSMB4P28070 264 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 NRIP1P48552 1158 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 PDIA2Q13087 525 aaKnown RBP19.89■□□□□ 0.77
CHTOP-204ENST00000368694 POLD3Q15054 466 aaPredicted RBP19.89■□□□□ 0.77
CHTOP-204ENST00000368694 C5orf22Q49AR2 442 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 TEX44Q53QW1 395 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 ARHGAP15Q53QZ3 475 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 HP1BP3Q5SSJ5 553 aaPredicted RBP19.89■□□□□ 0.77
CHTOP-204ENST00000368694 UBAP2Q5T6F2 1119 aaKnown RBP19.89■□□□□ 0.77
CHTOP-204ENST00000368694 PPP1R21Q6ZMI0 780 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 LRRC49Q8IUZ0 686 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 ZBED8Q8IZ13 594 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 PDIK1LQ8N165 341 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 GOLGA6L1Q8N7Z2 621 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 OR2W6PQ8NHA6 318 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 USP33Q8TEY7 942 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 C9orf72Q96LT7 481 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 VAT1Q99536 393 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 SLC46A2Q9BY10 475 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 LMAN2LQ9H0V9 348 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 EPB41L4BQ9H329 900 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 ZNF212Q9UDV6 495 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 SH3BP1Q9Y3L3 701 aa19.89■□□□□ 0.77
CHTOP-204ENST00000368694 LATS1O95835 1130 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 CCNB1P14635 433 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 MAGEA4P43358 317 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 SGSHP51688 502 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 IFFO1Q0D2I5 559 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 SEMA5AQ13591 1074 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 SLC29A2Q14542 456 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 TEAD2Q15562 447 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 FNBP1LQ5T0N5 605 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 GRASPQ7Z6J2 395 aaPredicted RBP19.88■□□□□ 0.77
CHTOP-204ENST00000368694 TNS4Q8IZW8 715 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 UHMK1Q8TAS1 419 aaKnown RBP19.88■□□□□ 0.77
CHTOP-204ENST00000368694 PRKD2Q9BZL6 878 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 CFAP97Q9P2B7 532 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 RSPH14Q9UHP6 348 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 IPO11Q9UI26 975 aaKnown RBP19.88■□□□□ 0.77
CHTOP-204ENST00000368694 TRHDEQ9UKU6 1024 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 TTLL3Q9Y4R7 772 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 EPOPA6NHQ4 379 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 ZBTB24O43167 697 aaPredicted RBP19.88■□□□□ 0.77
CHTOP-204ENST00000368694 BANF1O75531 89 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 NEBLO76041 1014 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 PFKLP17858 780 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 AVPR1AP37288 418 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 CDH4P55283 916 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 NTHL1P78549 312 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 FASTKD3Q14CZ7 662 aaKnown RBP19.88■□□□□ 0.77
CHTOP-204ENST00000368694 KYNUQ16719 465 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 SLC5A9Q2M3M2 681 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 PARP6Q2NL67 630 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 LEMD2Q8NC56 503 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 SMG9Q9H0W8 520 aaKnown RBP19.88■□□□□ 0.77
CHTOP-204ENST00000368694 SP110Q9HB58 689 aa19.88■□□□□ 0.77
CHTOP-204ENST00000368694 NOTCH4Q99466 2003 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 MATN3O15232 486 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 DDX6P26196 483 aaKnown RBP eCLIP19.87■□□□□ 0.772e-9■■□□□ 12.3
CHTOP-204ENST00000368694 MAGEA6P43360 314 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 BBS9Q3SYG4 887 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 PARP15Q460N3 678 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 ITPRIPL1Q6GPH6 555 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 RELL1Q8IUW5 271 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 PIDD1Q9HB75 910 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 NINJ2Q9NZG7 142 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 IGSF9Q9P2J2 1179 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 STOML2Q9UJZ1 356 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 CLDN11O75508 207 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 TTC4O95801 387 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 TPSB2P20231 275 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 NUMBP49757 651 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 TPSAB1Q15661 275 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 DUSP6Q16828 381 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 ANO4Q32M45 955 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 CEP85LQ5SZL2 805 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 LRIG3Q6UXM1 1119 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 Q6ZNB5 142 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 ANKMY2Q8IV38 441 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 PDCD7Q8N8D1 485 aaKnown RBP19.87■□□□□ 0.77
CHTOP-204ENST00000368694 SERPINB12Q96P63 405 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 GBA3Q9H227 469 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 MED4Q9NPJ6 270 aa19.87■□□□□ 0.77
CHTOP-204ENST00000368694 A0A1B0GVM2 712 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 TYW5A2RUC4 315 aaKnown RBP19.86■□□□□ 0.77
CHTOP-204ENST00000368694 TCAF2A6NFQ2 919 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 H3BQF6 201 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 GREM1O60565 184 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 YBEYP58557 167 aaPredicted RBP19.86■□□□□ 0.77
CHTOP-204ENST00000368694 IFI35P80217 286 aaPredicted RBP19.86■□□□□ 0.77
CHTOP-204ENST00000368694 SLC20A2Q08357 652 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 MSS51Q4VC12 460 aa19.86■□□□□ 0.77
CHTOP-204ENST00000368694 TTC39BQ5VTQ0 682 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms