RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SNAP91O60641 907 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 ASLP04424 464 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 EPHX1P07099 455 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 RARAP10276 462 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 GABRG2P18507 467 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 OXCT1P55809 520 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 ECT2LQ008S8 904 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 MESDQ14696 234 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 C6orf118Q5T5N4 469 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 WDR5BQ86VZ2 330 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 LONP2Q86WA8 852 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 ACRBPQ8NEB7 543 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 HSPH1Q92598 858 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 FAM126AQ9BYI3 521 aaPredicted RBP15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 IRF2BPLQ9H1B7 796 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 POLMQ9NP87 494 aaPredicted RBP15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 PCDHGA2Q9Y5H1 932 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 CACNA1HO95180 2353 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 USP34Q70CQ2 3546 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 LILRB5O75023 590 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 MTA2O94776 668 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 GOT1P17174 413 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 NDUFV2P19404 249 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 GLDCP23378 1020 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 NBL1P41271 181 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 NRLP54845 237 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 TAS2R40P59535 323 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 TPI1P60174 286 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 SPA17Q15506 151 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 PPP6R3Q5H9R7 873 aaPredicted RBP15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 RHOT2Q8IXI1 618 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 NCAPGQ9BPX3 1015 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 EBF1Q9UH73 591 aa15.46■□□□□ 0.07
SMPDL3A-201ENST00000368440 ILVBLA1L0T0 632 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 TTC34A8MYJ7 566 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 EEF2KO00418 725 aaKnown RBP15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 AXIN1O15169 862 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 NRDCO43847 1150 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 GJC1P36383 396 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 ACVRL1P37023 503 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 SSR1P43307 286 aaKnown RBP15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 MAPKAPK2P49137 400 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 GNA12Q03113 381 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 ATP13A4Q4VNC1 1196 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 RTL3Q8N8U3 475 aaKnown RBP15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 NOL6Q9H6R4 1146 aaKnown RBP15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 BCCIPQ9P287 314 aaKnown RBP eCLIP15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 VPS51Q9UID3 782 aa15.46■□□□□ 0.06
SMPDL3A-201ENST00000368440 HRO43593 1189 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 SRPRAP08240 638 aaKnown RBP15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 COPAP53621 1224 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 ST8SIA6P61647 398 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 STARD3Q14849 445 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 TCEAL1Q15170 157 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 DPYSL2Q16555 572 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 CACUL1Q86Y37 369 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 PSTKQ8IV42 348 aaKnown RBP15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 ATRIPQ8WXE1 791 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 MKRN2Q9H000 416 aaKnown RBP15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 CD93Q9NPY3 652 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 CWC15Q9P013 229 aaKnown RBP15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 SALL4Q9UJQ4 1053 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 INVSQ9Y283 1065 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 PLXND1Q9Y4D7 1925 aa15.45■□□□□ 0.06
SMPDL3A-201ENST00000368440 CCDC163A0A0D9SF12 145 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ALDH1A2O94788 518 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 MT-CO1P00395 513 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 VAV1P15498 845 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 MAN1A1P33908 653 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 SULT2A1Q06520 285 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 CAMK2GQ13555 558 aaPredicted RBP15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 E2F5Q15329 346 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 BOLA3Q53S33 107 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 LINGO4Q6UY18 593 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 RFX8Q6ZV50 586 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 PGBD3Q8N328 593 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 DCAF4L2Q8NA75 395 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 TEKT4Q8WW24 435 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ARHGEF2Q92974 986 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 MRGPRX1Q96LB2 322 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 DESI2Q9BSY9 194 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 SPON2Q9BUD6 331 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 CATSPERBQ9H7T0 1116 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 PCDH18Q9HCL0 1135 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ATP13A1Q9HD20 1204 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 PRSS16Q9NQE7 514 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 KLHL11Q9NVR0 708 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 HYOU1Q9Y4L1 999 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ACTL7AQ9Y615 435 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 A0A0U1RQJ8 604 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 WASH4PA8MWX3 477 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 DCLK1O15075 740 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 SYNCRIPO60506 623 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ZMPSTE24O75844 475 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 CD48P09326 243 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 HNRNPA1L2Q32P51 320 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ZC3H14Q6PJT7 736 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms