RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 PIF1Q9H611 641 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 PRDM5Q9NQX1 630 aaPredicted RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 TUBGCP4Q9UGJ1 667 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 PLA2G4CQ9UP65 541 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 CHKBQ9Y259 395 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 HBS1LQ9Y450 684 aaKnown RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 NRCAMQ92823 1304 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 DAB1O75553 588 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 SERPINF2P08697 491 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 TCF4P15884 667 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 TTC23LQ6PF05 361 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 LBX2Q6XYB7 198 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 BORCS6Q96GS4 357 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 ZNF317Q96PQ6 595 aaPredicted RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 GBA2Q9HCG7 927 aaPredicted RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 SLC12A4Q9UP95 1085 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 EIF3LQ9Y262 564 aaKnown RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 SMIM10L2AP0DMW4 78 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 SMIM10L2BP0DMW5 78 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 CHRNB3Q05901 458 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 EP400NLQ6ZTU2 488 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 COLEC11Q9BWP8 271 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 SDCBP2Q9H190 292 aa11.89□□□□□ -0.51
COPA-202ENST00000368069 NXF3Q9H4D5 531 aaKnown RBP11.89□□□□□ -0.51
COPA-202ENST00000368069 A0A087X1B8 175 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 SMNDC1O75940 238 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■■□ 25.1
COPA-202ENST00000368069 SERPINB10P48595 397 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 SCNN1GP51170 649 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 USP4Q13107 963 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 CDH18Q13634 790 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 ATP6AP1LQ52LC2 224 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 SLC39A4Q6P5W5 647 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TNIP2Q8NFZ5 429 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 PGLYRP2Q96PD5 576 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TRAPPC9Q96Q05 1148 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 SEMA6AQ9H2E6 1030 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 STN1Q9H668 368 aaKnown RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 CAB39LQ9H9S4 337 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 PTPRHQ9HD43 1115 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 SSU72Q9NP77 194 aaKnown RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 PCDHB7Q9Y5E2 793 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TMEM114B3SHH9 223 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TNFAIP8O95379 198 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TPSB2P20231 275 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 CRHR1P34998 444 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 ALDH1A3P47895 512 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TPSAB1Q15661 275 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 PMF1Q6P1K2 205 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 ANKS1BQ7Z6G8 1248 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 ADCK1Q86TW2 530 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 FBXO39Q8N4B4 442 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 GSTCDQ8NEC7 633 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 FBXL18Q96ME1 805 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 OMDQ99983 421 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 PDZD7Q9H5P4 517 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 DENND2DQ9H6A0 471 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 IRAK4Q9NWZ3 460 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 KANSL1LA0AUZ9 987 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 BCLAF3A2AJT9 711 aaKnown RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 CBX4O00257 560 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 HDAC3O15379 428 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 TCEA3O75764 348 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 TMEM63AO94886 807 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 RHOCP08134 193 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 EPHA3P29320 983 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 CACHD1Q5VU97 1274 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 KCTD15Q96SI1 283 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 KCTD14Q9BQ13 255 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 SLC25A23Q9BV35 468 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 SCHIP1Q9P0W5 487 aaPredicted RBP11.88□□□□□ -0.51
COPA-202ENST00000368069 LZTS1Q9Y250 596 aa11.88□□□□□ -0.51
COPA-202ENST00000368069 EVPLLA8MZ36 301 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 TRIM16O95361 564 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 FASP25445 335 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 OR1E1P30953 314 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 C9orf57Q5W0N0 161 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 LPCAT1Q8NF37 534 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 FAM192AQ9GZU8 254 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MOSPD1Q9UJG1 213 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 NDUFAF1Q9Y375 327 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 PSMD12O00232 456 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 MFSD11O43934 449 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 CCNB1P14635 433 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SERPINH1P50454 418 aaKnown RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 GTF2H3Q13889 308 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 EML3Q32P44 896 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 TTLL9Q3SXZ7 439 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SLC25A52Q3SY17 297 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 TXNRD3NBQ6F5E7 133 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms