RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PTCH2Q9Y6C5 1203 aa14.59□□□□□ -0.07
CD48-201ENST00000368045 PDCD11Q14690 1871 aaKnown RBP14.59□□□□□ -0.07
CD48-201ENST00000368045 EIF4E1BA6NMX2 242 aaKnown RBP14.58□□□□□ -0.08
CD48-201ENST00000368045 ZBTB24O43167 697 aaPredicted RBP14.58□□□□□ -0.08
CD48-201ENST00000368045 BUD23O43709 281 aaKnown RBP14.58□□□□□ -0.08
CD48-201ENST00000368045 AHCYL1O43865 530 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 BAG2O95816 211 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 FESP07332 822 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 NCF2P19878 526 aaPredicted RBP14.58□□□□□ -0.08
CD48-201ENST00000368045 LHX1P48742 406 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 TUBP50607 506 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 COG7P83436 770 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 PRPSAP1Q14558 356 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 MFSD10Q14728 455 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.08
CD48-201ENST00000368045 RAB41Q5JT25 222 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 WSCD1Q658N2 575 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 ATG14Q6ZNE5 492 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 HFE2Q6ZVN8 426 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 PLEKHH3Q7Z736 793 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 ANKRD23Q86SG2 305 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 DHDDSQ86SQ9 333 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 RSPH3Q86UC2 560 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 KCNMB4Q86W47 210 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 URGCPQ8TCY9 931 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 DNAJB3Q8WWF6 145 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 PPP1R10Q96QC0 940 aaKnown RBP14.58□□□□□ -0.08
CD48-201ENST00000368045 KCNK16Q96T55 309 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 YIPF3Q9GZM5 350 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 FAM192AQ9GZU8 254 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 COG4Q9H9E3 785 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 NMRAL1Q9HBL8 299 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 SLC38A7Q9NVC3 462 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 RNF181Q9P0P0 153 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 CDH22Q9UJ99 828 aa14.58□□□□□ -0.08
CD48-201ENST00000368045 BTBD19C9JJ37 291 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 FAM72CH0Y354 149 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 NRP1O14786 923 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 C2P06681 752 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 COX4I1P13073 169 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 ITGAXP20702 1163 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CD68P34810 354 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 POLD2P49005 469 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CSRP3P50461 194 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CCNHP51946 323 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 GTF2A2P52657 109 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CACNA2D1P54289 1103 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 MAP3K7CLP57077 242 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CDC16Q13042 620 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 ANO4Q32M45 955 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 MAP3K21Q5TCX8 1036 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 FAM72AQ5TYM5 149 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 NAPEPLDQ6IQ20 393 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 FAM72DQ6L9T8 149 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 LINC00523Q86TU6 105 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 FAM35AQ86V20 835 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 FAM72BQ86X60 149 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 POU5F2Q8N7G0 328 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 NETO2Q8NC67 525 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 RNF169Q8NCN4 708 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 SMG8Q8ND04 991 aaKnown RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 TMEM40Q8WWA1 233 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CNDP1Q96KN2 507 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TEKT5Q96M29 485 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TSNARE1Q96NA8 513 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 AGAP3Q96P47 875 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 GPR22Q99680 433 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 MLPHQ9BV36 600 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 ILKAPQ9H0C8 392 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 SPATS2LQ9NUQ6 558 aaKnown RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 ZNF358Q9NW07 568 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TRIP11Q15643 1979 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 SLCO1B7G3V0H7 640 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 HAS3O00219 553 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 DYNC1LI2O43237 492 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 ADCY6O43306 1168 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 AP1G2O75843 785 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 LTFP02788 710 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 COL6A2P12110 1019 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 GLDCP23378 1020 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 ADSLP30566 484 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 PSEN2P49810 448 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CDH17Q12864 832 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 KLF10Q13118 480 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 CCNIQ14094 377 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 HSP90AA5PQ58FG0 334 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 ZYG11AQ6WRX3 759 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TP53INP2Q8IXH6 220 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 PLD6Q8N2A8 252 aaKnown RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 FBXW8Q8N3Y1 598 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TDRD5Q8NAT2 981 aaKnown RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 IRGQQ8WZA9 623 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 VPS39Q96JC1 886 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TSGA13Q96PP4 275 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 TSC22D3Q99576 134 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 KIFC1Q9BW19 673 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 C20orf96Q9NUD7 363 aaPredicted RBP14.57□□□□□ -0.08
CD48-201ENST00000368045 OXSMQ9NWU1 459 aa14.57□□□□□ -0.08
CD48-201ENST00000368045 DDIT4Q9NX09 232 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms