RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 GALNT7Q86SF2 657 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 MIB1Q86YT6 1006 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ANKLE1Q8NAG6 615 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 EAF2Q96CJ1 260 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 ZSCAN5AQ9BUG6 496 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 IRX2Q9BZI1 471 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 ADAMTS1Q9UHI8 967 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 GGA2Q9UJY4 613 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 H3BMM5 538 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 COQ9O75208 318 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 PALMO75781 387 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 KLHL2O95198 593 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 CCNE1P24864 410 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 FNTAP49354 379 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 BCAR1P56945 870 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 SELENOVP59797 346 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.79□□□□□ -1
SYNE1-206ENST00000367253 NFE2L1Q14494 772 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 MAPK11Q15759 364 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 TIGD7Q6NT04 549 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 TMEM270Q6UE05 265 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 CAMK1DQ8IU85 385 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 VPS33AQ96AX1 596 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 FEM1CQ96JP0 617 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 RTP3Q9BQQ7 232 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 BRINP2Q9C0B6 783 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 SAMSN1Q9NSI8 373 aaKnown RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 GCNT4Q9P109 453 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 DNAJB4Q9UDY4 337 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 WNT10BO00744 389 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 TIMM44O43615 452 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 KERAO60938 352 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 OR6A2O95222 327 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 KCNH1O95259 989 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 FGFR1P11362 822 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ENO3P13929 434 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 GDI1P31150 447 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 LIFRP42702 1097 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 MAGEA6P43360 314 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 MASP1P48740 699 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PHC1P78364 1004 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 GRM3Q14832 879 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 VASH1Q7L8A9 365 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 PRUNE1Q86TP1 453 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 SNX31Q8N9S9 440 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 DNAJB3Q8WWF6 145 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PRCCQ92733 491 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 RERGQ96A58 199 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 PAGE5Q96GU1 130 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PLEKHA8Q96JA3 519 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 MAN1B1Q9UKM7 699 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 NUDT19A8MXV4 375 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 F5H423 210 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 IGF2BP3O00425 579 aaKnown RBP eCLIP8.78□□□□□ -1
SYNE1-206ENST00000367253 TLR2O60603 784 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PTPN21Q16825 1174 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ZC3H12AQ5D1E8 599 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 ARL6IP4Q66PJ3 421 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 ZNF425Q6IV72 752 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 SCIMPQ6UWF3 145 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ATG14Q6ZNE5 492 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 RIOX2Q8IUF8 465 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ZNF786Q8N393 782 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 GOLM1Q8NBJ4 401 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PHB2Q99623 299 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 RNF38Q9H0F5 515 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 AGPAT3Q9NRZ7 376 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PSME2Q9UL46 239 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 ESYT3A0FGR9 886 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 SAC3D1A6NKF1 404 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 RNF103O00237 685 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 CLPTM1O96005 669 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 S100A12P80511 92 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 MPP2Q14168 576 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 TRADDQ15628 312 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ZNHIT3Q15649 155 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 INSCQ1MX18 579 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 FASTKD1Q53R41 847 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 TCEAL5Q5H9L2 206 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 EMC10Q5UCC4 262 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 P4HA3Q7Z4N8 544 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 AKAP14Q86UN6 197 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ADGRF4Q8IZF3 695 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ZCCHC7Q8N3Z6 543 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 PCYOX1LQ8NBM8 494 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 MSANTD3Q96H12 275 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 PRMT1Q99873 361 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 CCDC177Q9NQR7 707 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 H2AFY2Q9P0M6 372 aaPredicted RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 C14orf166Q9Y224 244 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 B2RBV5 119 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 ZNF879B4DU55 563 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 VEGFDO43915 354 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 KATNA1O75449 491 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 EIF4BP23588 611 aaKnown RBP8.78□□□□□ -1
SYNE1-206ENST00000367253 CACNA2D1P54289 1103 aa8.78□□□□□ -1
SYNE1-206ENST00000367253 USP46P62068 366 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms