RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 LRRC40Q9H9A6 602 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 IL1RL2Q9HB29 575 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 C6orf203Q9P0P8 240 aaPredicted RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 MORF4L1Q9UBU8 362 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 STK39Q9UEW8 545 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ZNF711Q9Y462 761 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 PCDHB12Q9Y5F1 795 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 COL2A1P02458 1487 aaPredicted RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 ARHGEF37A1IGU5 675 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 TMEM233B4DJY2 109 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 M0QYT0 321 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 EEF2KO00418 725 aaKnown RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 MDM4O15151 490 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ARF4P18085 180 aaPredicted RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 NR2C2P49116 596 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 PLK1P53350 603 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 RABGGTBP53611 331 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 SLC12A2P55011 1212 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 INHBCP55103 352 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 NME5P56597 212 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 RALGDSQ12967 914 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 PDAP1Q13442 181 aaKnown RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 HNRNPDQ14103 355 aaKnown RBP8.35□□□□□ -1.07
CD46-208ENST00000367042 GRTP1Q5TC63 336 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 LRRC8EQ6NSJ5 796 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 LRRC8BQ6P9F7 803 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ADGRG6Q86SQ4 1221 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 KCNMB4Q86W47 210 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 MYO1HQ8N1T3 1032 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 DNERQ8NFT8 737 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ZFP28Q8NHY6 868 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 ATP6V1E2Q96A05 226 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 CPNE1Q99829 537 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 TMEM79Q9BSE2 394 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 DCUN1D5Q9BTE7 237 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 CCDC28BQ9BUN5 200 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 SNX25Q9H3E2 840 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 EFCAB1Q9HAE3 211 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 CHRAC1Q9NRG0 131 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 MKS1Q9NXB0 559 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.35□□□□□ -1.07
CD46-208ENST00000367042 CCDC167Q9P0B6 97 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 AURKCQ9UQB9 309 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 TNFSF13BQ9Y275 285 aa8.35□□□□□ -1.07
CD46-208ENST00000367042 HDAC3O15379 428 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 STRNO43815 780 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 GSRP00390 522 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 GMPSP49915 693 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 RPL14P50914 215 aaKnown RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 OAZ1P54368 228 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 MBTD1Q05BQ5 628 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PPIDQ08752 370 aaKnown RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 MYLK3Q32MK0 819 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PGM2L1Q6PCE3 622 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 ZNF567Q8N184 647 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 REPS2Q8NFH8 660 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SLC2A14Q8TDB8 520 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 KCTD4Q8WVF5 259 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 EXT2Q93063 718 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 FCRL3Q96P31 734 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 BTBD9Q96Q07 612 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 LRRC4Q9HBW1 653 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 TRIP11Q15643 1979 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 A0A1B0GTW7 788 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 H3BNX3 289 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 AKAP10O43572 662 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 TFAP2AP05549 437 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 INSRRP14616 1297 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 HNRNPLP14866 589 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■□□□□ 10.5
CD46-208ENST00000367042 TFEBP19484 476 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 ATICP31939 592 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 NUMBP49757 651 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 ADARP55265 1226 aaKnown RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 PITX1P78337 314 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 XIAPP98170 497 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 MS4A2Q01362 244 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 ADIGQ0VDE8 80 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SEPT6Q14141 434 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 TREML2Q5T2D2 321 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 EPGNQ6UW88 154 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 DLK2Q6UY11 383 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 TIFABQ6ZNK6 161 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 GK5Q6ZS86 529 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 ACVR1CQ8NER5 493 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 RTP4Q96DX8 246 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 VPS39Q96JC1 886 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 HAPLN3Q96S86 360 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 MPHOSPH6Q99547 160 aaKnown RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 ZDHHC7Q9NXF8 308 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SNTG2Q9NY99 539 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 HEMK1Q9Y5R4 338 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 SOWAHBA6NEL2 793 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 SUPT3HO75486 399 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PFKMP08237 780 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 PPARGP37231 505 aaPredicted RBP8.34□□□□□ -1.07
CD46-208ENST00000367042 ETFBP38117 255 aa8.34□□□□□ -1.07
CD46-208ENST00000367042 NIPAL4Q0D2K0 466 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms