RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 CLCN2P51788 898 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 HDAC4P56524 1084 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 UBXN1Q04323 297 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 OCA2Q04671 838 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KIAA2012Q0VF49 1180 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MESP2Q0VG99 397 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CSTF3Q12996 717 aaKnown RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 BAATQ14032 418 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLC18A3Q16572 532 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ATG9BQ674R7 924 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ZNF449Q6P9G9 518 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RTL10Q7L3V2 364 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GALNT7Q86SF2 657 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GPR149Q86SP6 731 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SDCCAG8Q86SQ7 713 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FAM124AQ86V42 546 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CARFQ8N187 725 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ADPRHL1Q8NDY3 354 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 BEND2Q8NDZ0 799 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 Q8NFD4 153 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SH3RF3Q8TEJ3 882 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SNX21Q969T3 373 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FAM162AQ96A26 154 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TBC1D31Q96DN5 1066 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 WDFY2Q96P53 400 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DCLRE1CQ96SD1 692 aaKnown RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ABHD1Q96SE0 405 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DIRC2Q96SL1 478 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FIZ1Q96SL8 496 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 NEU1Q99519 415 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DPYSL5Q9BPU6 564 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TUBB6Q9BUF5 446 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CINPQ9BW66 212 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TPSD1Q9BZJ3 242 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TRIM31Q9BZY9 425 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DNAI2Q9GZS0 605 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DEF6Q9H4E7 631 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLC32A1Q9H598 525 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CDCP1Q9H5V8 836 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SEC61A2Q9H9S3 476 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SCPEP1Q9HB40 452 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 LTB4R2Q9NPC1 389 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RRP7BPQ9NSQ0 103 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FAM53CQ9NYF3 392 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 WDR35Q9P2L0 1181 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PEMTQ9UBM1 199 aa3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SEC63Q9UGP8 760 aaKnown RBP3.93□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ABCC9O60706 1549 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 LOC100509620A0A075B734 347 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 A1L4Q6 167 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 OR2A25A4D2G3 310 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ZNF503-AS2A6NEH8 195 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 BTBD18B2RXH4 712 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TRIM24O15164 1050 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PPM1DO15297 605 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLC16A3O15427 465 aaKnown RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 HBP1O60381 514 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GALTP07902 379 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ABCB1P08183 1280 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 THEGLP0DJG4 465 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CREB1P16220 341 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GABRB1P18505 474 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PRPH2P23942 346 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GSTM2P28161 218 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DUSP1P28562 367 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 HOXA13P31271 388 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GKP32189 559 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CXCR5P32302 372 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 LIPAP38571 399 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ALDH3A2P51648 485 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 STAT2P52630 851 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 OAZ1P54368 228 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 BPIFB3P59826 476 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SP2Q02086 613 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FRG1Q14331 258 aaKnown RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PKN2Q16513 984 aaKnown RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MMEL1Q495T6 779 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CRY2Q49AN0 593 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GXYLT1Q4G148 440 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ZNF628Q5EBL2 1059 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 COLEC12Q5KU26 742 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GKAP1Q5VSY0 366 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FAM171A1Q5VUB5 890 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 NAIF1Q69YI7 327 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SP5Q6BEB4 398 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 JADE1Q6IE81 842 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MTFR2Q6P444 385 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 IYDQ6PHW0 289 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLC2A7Q6PXP3 512 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLC39A5Q6ZMH5 540 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PLEKHH3Q7Z736 793 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GLRX5Q86SX6 157 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TADA2BQ86TJ2 420 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TMPRSS6Q8IU80 811 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 LINC00346Q8IVM7 164 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MAPKAPK5Q8IW41 473 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CCDC170Q8IYT3 715 aa3.92□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ABI1Q8IZP0 508 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms