RNA–Protein interactions for RNA: ENST00000360906.9

NLRC4-202, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-202ENST00000360906 CDK5RAP1Q96SZ6 601 aaKnown RBP6.61□□□□□ -1.35
NLRC4-202ENST00000360906 SP110Q9HB58 689 aa6.61□□□□□ -1.35
NLRC4-202ENST00000360906 NT5MQ9NPB1 228 aa6.61□□□□□ -1.35
NLRC4-202ENST00000360906 RRN3Q9NYV6 651 aa6.61□□□□□ -1.35
NLRC4-202ENST00000360906 IPO11Q9UI26 975 aaKnown RBP6.61□□□□□ -1.35
NLRC4-202ENST00000360906 CDC23Q9UJX2 597 aa6.61□□□□□ -1.35
NLRC4-202ENST00000360906 MTF2Q9Y483 593 aaPredicted RBP6.61□□□□□ -1.35
NLRC4-202ENST00000360906 PIAS3Q9Y6X2 628 aa6.61□□□□□ -1.35
NLRC4-202ENST00000360906 COL4A3Q01955 1670 aa6.61□□□□□ -1.35
NLRC4-202ENST00000360906 TMEM265A0A087WTH1 108 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PRRT4C9JH25 899 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 TJP3O95049 919 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CHRM1P11229 460 aaPredicted RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 TCP1P17987 556 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SCNN1BP51168 640 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SLC10A7Q0GE19 358 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SMAD4Q13485 552 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PPP1R7Q15435 360 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 EML3Q32P44 896 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 DGKKQ5KSL6 1271 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 RABGAP1LQ5R372 815 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 MFSD6LQ8IWD5 586 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CHPFQ8IZ52 775 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PRELID2Q8N945 189 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SPATA4Q8NEY3 305 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SPATA22Q8NHS9 363 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 OVCA2Q8WZ82 227 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 LRRC1Q9BTT6 524 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 DDX56Q9NY93 547 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 DEC1Q9P2X7 70 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 INTS6Q9UL03 887 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 INVSQ9Y283 1065 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CFAP54Q96N23 3096 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 E2F8A0AVK6 867 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 BUD23O43709 281 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PMPCBO75439 489 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PIAS1O75925 651 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 DGKGP49619 791 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 GALK1P51570 392 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SMAD2Q15796 467 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 ERCC6LQ2NKX8 1250 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SNX30Q5VWJ9 437 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 TMEM215Q68D42 235 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CCDC137Q6PK04 289 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CHST9Q7L1S5 443 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SIX5Q8N196 739 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 ATPAF2Q8N5M1 289 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PNPLA1Q8N8W4 532 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 LEMD2Q8NC56 503 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 OSCP1Q8WVF1 389 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SUSD6Q92537 303 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 HAPLN3Q96S86 360 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 DCLK3Q9C098 648 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 NOL6Q9H6R4 1146 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 ASIC3Q9UHC3 531 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SNX24Q9Y343 169 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CABIN1Q9Y6J0 2220 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 ABCA7Q8IZY2 2146 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CTAGE15A4D2H0 777 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 MCF2LO15068 1137 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 OLFM2O95897 454 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 MT-CYBP00156 380 aaPredicted RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 IGLV3-27P01718 113 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 DCNP07585 359 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CTAGE8P0CG41 777 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SCNN1AP37088 669 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 BASP1P80723 227 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 AMPD2Q01433 879 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 GNA12Q03113 381 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 HTR4Q13639 388 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 ACAP1Q15027 740 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 NOMO1Q15155 1222 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 SKIDA1Q1XH10 827 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 FYB2Q5VWT5 728 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PAPD7Q5XG87 772 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 Q6ZS52 159 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 TPRG1Q6ZUI0 275 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CTAGE6Q86UF2 777 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CCDC25Q86WR0 208 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CTAGE4Q8IX94 777 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 UHMK1Q8TAS1 419 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PGAP3Q96FM1 320 aaPredicted RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 PRMT1Q99873 361 aaKnown RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CARD9Q9H257 536 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 CATSPERBQ9H7T0 1116 aa6.6□□□□□ -1.35
NLRC4-202ENST00000360906 RBM22Q9NW64 420 aaKnown RBP eCLIP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 KLHL8Q9P2G9 620 aaPredicted RBP6.6□□□□□ -1.35
NLRC4-202ENST00000360906 A0A1B0GVM2 712 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 TCAF2A6NFQ2 919 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 TTC34A8MYJ7 566 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 LUC7L3O95232 432 aaKnown RBP6.59□□□□□ -1.35
NLRC4-202ENST00000360906 TPH1P17752 444 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 ITIH2P19823 946 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 LMAN1P49257 510 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 HADHBP55084 474 aaKnown RBP6.59□□□□□ -1.35
NLRC4-202ENST00000360906 GSCP56915 257 aaPredicted RBP6.59□□□□□ -1.35
NLRC4-202ENST00000360906 GAD2Q05329 585 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 RING1Q06587 406 aa6.59□□□□□ -1.35
NLRC4-202ENST00000360906 EIF4EBP2Q13542 120 aaPredicted RBP6.59□□□□□ -1.35
NLRC4-202ENST00000360906 BYSLQ13895 437 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms