RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 RAB3IL1Q8TBN0 382 aa13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 KCNN1Q92952 543 aa13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 CELF6Q96J87 481 aaKnown RBP13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 APBA2Q99767 749 aa13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 SMARCAD1Q9H4L7 1026 aa13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 LIN28AQ9H9Z2 209 aaKnown RBP13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 CDHR5Q9HBB8 845 aa13.74□□□□□ -0.21
PPARGC1B-202ENST00000360453 DPYSL4O14531 572 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 HBP1O60381 514 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 DNAJA2O60884 412 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 CRTAMO95727 393 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 SMIM18P0DKX4 95 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 MCF2P10911 925 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 GRK2P25098 689 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 GRIA4P48058 902 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 HARS2P49590 506 aaKnown RBP13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 NADK2Q4G0N4 442 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 STEAP4Q687X5 459 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 APLFQ8IW19 511 aaPredicted RBP13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 KCTD4Q8WVF5 259 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 LRGUKQ96M69 825 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 PKP2Q99959 881 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 PCDHAC1Q9H158 963 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 NXF3Q9H4D5 531 aaKnown RBP13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 ASB7Q9H672 318 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 NMRAL1Q9HBL8 299 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 AP4B1Q9Y6B7 739 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 ANKRD33BA6NCL7 494 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 NEMP2A6NFY4 417 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 ZBTB24O43167 697 aaPredicted RBP13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 FBXO21O94952 628 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 TGFB3P10600 412 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 DESP17661 470 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 NMBRP28336 390 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 RIOX2Q8IUF8 465 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 OLFM3Q96PB7 478 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■■■■ 39.3
PPARGC1B-202ENST00000360453 GMPR2Q9P2T1 348 aaKnown RBP13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 VANGL2Q9ULK5 521 aa13.73□□□□□ -0.21
PPARGC1B-202ENST00000360453 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 CLPTM1O96005 669 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 TFAP2AP05549 437 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 SRGAP2BP0DMP2 458 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PTPN1P18031 435 aaKnown RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 SOX11P35716 441 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 GRM3Q14832 879 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 AMIGO2Q86SJ2 522 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 RNF135Q8IUD6 432 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 RBBP8Q99708 897 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 DNAJB4Q9UDY4 337 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 TLL2Q9Y6L7 1015 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 TRIM13O60858 407 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 USP2O75604 605 aaPredicted RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 HNRNPLP14866 589 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■■□ 20.4
PPARGC1B-202ENST00000360453 CTBP1Q13363 440 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 SNAPC2Q13487 334 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 KLHL32Q96NJ5 620 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 ATXN3LQ9H3M9 355 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 CYP4F12Q9HCS2 524 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PIGVQ9NUD9 493 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 ADA2Q9NZK5 511 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 SORCS3Q9UPU3 1222 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 LAMA3Q16787 3333 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 LGALS2P05162 132 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PABPC4LP0CB38 370 aaKnown RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 TSPAN8P19075 237 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 CNTFP26441 200 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PCSK6P29122 969 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 NR2C2P49116 596 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PLK1P53350 603 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 RALGDSQ12967 914 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 LSAMPQ13449 338 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 CYP2R1Q6VVX0 501 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 DENND6AQ8IWF6 608 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 NPWQ8N729 165 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 OPTNQ96CV9 577 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 ACE2Q9BYF1 805 aaPredicted RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 PREBQ9HCU5 417 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 VCX3AQ9NNX9 186 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
PPARGC1B-202ENST00000360453 VILLO15195 856 aa13.71□□□□□ -0.21
PPARGC1B-202ENST00000360453 TFEBP19484 476 aa13.71□□□□□ -0.21
PPARGC1B-202ENST00000360453 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms