RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 GPD2P43304 727 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 RASGEF1AQ8N9B8 481 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PPP1R16AQ96I34 528 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 MARK1Q9P0L2 795 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 SUCOQ9UBS9 1254 aaKnown RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 KRT33AO76009 404 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PTPN1P18031 435 aaKnown RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 KCNJ2P63252 427 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 VPS72Q15906 364 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 DHDDSQ86SQ9 333 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 OR8H1Q8NGG4 311 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF668Q96K58 619 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF518BQ9C0D4 1074 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TUBE1Q9UJT0 475 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 SERPINE1P05121 402 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 IST1P53990 364 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 CHST13Q8NET6 341 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 C18orf25Q96B23 403 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 TOR4AQ9NXH8 423 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 DNPEPQ9ULA0 475 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC9A8Q9Y2E8 581 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 PCDHGC5Q9Y5F6 944 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 PALLDQ8WX93 1383 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 CYP2A6P11509 494 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 DNAJB2P25686 324 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 GPR15P49685 360 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 KLHDC7AQ5VTJ3 777 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 METTL3Q86U44 580 aaKnown RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 EEF1AKMT1Q8WVE0 214 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 ERGIC2Q96RQ1 377 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 REEP2Q9BRK0 252 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 LRRC40Q9H9A6 602 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 GLP2RO95838 553 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 NUDT14O95848 222 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 PCNAP12004 261 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 ERCC2P18074 760 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 BCAT1P54687 386 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 ACTR3P61158 418 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 TAF1CQ15572 869 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 FBXW8Q8N3Y1 598 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 MYDGFQ969H8 173 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 MYBP10242 640 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 ACAD10Q6JQN1 1059 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 SNX32Q86XE0 403 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 PCSK9Q8NBP7 692 aaKnown RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 ZC3H10Q96K80 434 aaKnown RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 LRMDAQ9H2I8 198 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 SEMA4AQ9H3S1 761 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 MT-CO1P00395 513 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 NFKB1P19838 968 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 N4BP2L1Q5TBK1 243 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM110Q86TL2 294 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 UXTQ9UBK9 157 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC25A12O75746 678 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 MAPK9P45984 424 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 FNDC5Q8NAU1 212 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 SH3RF3Q8TEJ3 882 aaPredicted RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 APOPT1Q96IL0 206 aa13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
SRGAP3-201ENST00000360413 A0A0G2JPF8 293 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 HNRNPCL3B7ZW38 293 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 GCATO75600 419 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 UNC5CO95185 931 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 HNRNPCL4P0DMR1 293 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 GATAD2AQ86YP4 633 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 PARP8Q8N3A8 854 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF540Q8NDQ6 660 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 BBS4Q96RK4 519 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 NECTIN3Q9NQS3 549 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CKMP06732 381 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ETS1P14921 441 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 HUNKP57058 714 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 OCLNQ16625 522 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TBC1D25Q3MII6 688 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 EGFLAMQ63HQ2 1017 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CYP20A1Q6UW02 462 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 OR8H3Q8N146 312 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 FAM136AQ96C01 138 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM121Q9BTD3 319 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 REEP1Q9H902 201 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SP140LQ9H930 580 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 MAGEB3O15480 346 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 IRF1P10914 325 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ATF6P18850 670 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 DLG4P78352 724 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 BLOC1S5Q8TDH9 187 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TBATAQ96M53 351 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CHCHD6Q9BRQ6 235 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM216Q9P0N5 145 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 MAP10Q9P2G4 905 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 F5H6K3 240 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms