RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 OTOP3Q7RTS5 596 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 PID1Q7Z2X4 250 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 PDIK1LQ8N165 341 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 VPS52Q8N1B4 723 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 CFAP52Q8N1V2 620 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 SMYD1Q8NB12 490 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 ATP11CQ8NB49 1132 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 IGSF21Q96ID5 467 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 XPO6Q96QU8 1125 aaKnown RBP5.21□□□□□ -1.58
ATXN3-202ENST00000359366 GORASP1Q9BQQ3 440 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 KLC2Q9H0B6 622 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 SMOC2Q9H3U7 446 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 PAK5Q9P286 719 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 KLHL8Q9P2G9 620 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-202ENST00000359366 RABGEF1Q9UJ41 708 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 NEU3Q9UQ49 428 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 ACTL7AQ9Y615 435 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 COL4A6Q14031 1691 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 NYNRINQ9P2P1 1898 aaKnown RBP5.21□□□□□ -1.58
ATXN3-202ENST00000359366 TRIOO75962 3097 aa5.21□□□□□ -1.58
ATXN3-202ENST00000359366 A0A0A0MRY4 1105 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TCRBV9S1A1TA0A576 114 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SLC12A8A0AV02 714 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TMEM120BA0PK00 339 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SLC38A8A6NNN8 435 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 EIF3HO15372 352 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SHOX2O60902 331 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GJB5O95377 273 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 IGLV3-25P01717 112 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ZFXP17010 805 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SYN1P17600 705 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PTPN3P26045 913 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CCR1P32246 355 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CD68P34810 354 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CCT5P48643 541 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 NR2C2P49116 596 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SKOR1P84550 965 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SCAPQ12770 1279 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 BTG3Q14201 252 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PAFAH1B3Q15102 231 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PRKD1Q15139 912 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 QPCTQ16769 361 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CWF19L1Q69YN2 538 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SMYD5Q6GMV2 418 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 VSTM1Q6UX27 236 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CTAGE3PQ8IX95 158 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PARP9Q8IXQ6 854 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SPATA22Q8NHS9 363 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 BCAS4Q8TDM0 211 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 IRGQQ8WZA9 623 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 APBB2Q92870 758 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 WBP2Q969T9 261 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 NTAN1Q96AB6 310 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 RTP4Q96DX8 246 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PGM2Q96G03 612 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SPATA13Q96N96 652 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 KCNK17Q96T54 332 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 EPAS1Q99814 870 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PRMT1Q99873 361 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CLSTN3Q9BQT9 956 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 FRMD8P1Q9BZ68 369 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TRIM4Q9C037 500 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SLC39A8Q9C0K1 460 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 NACA2Q9H009 215 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 C11orf49Q9H6J7 331 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CYP4F11Q9HBI6 524 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GKN1Q9NS71 199 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CXXC1Q9P0U4 656 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 RABL2BQ9UNT1 228 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SCML2Q9UQR0 700 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GMEB1Q9Y692 573 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 COMMD10Q9Y6G5 202 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 DOCK4Q8N1I0 1966 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 MYOFQ9NZM1 2061 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 E2F8A0AVK6 867 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ARHGEF37A1IGU5 675 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 C2orf78A6NCI8 922 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 C5orf60A6NFR6 353 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 OR6C75A6NL08 312 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 A6NNZ2 444 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 RASA4BC9J798 803 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 E9PAM4 449 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GOLGA8TH3BQL2 631 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 RASA4O43374 803 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TBC1D4O60343 1298 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GCATO75600 419 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 MT-CYBP00156 380 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 F9P00740 461 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 HAPLN1P10915 354 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 BRAFP15056 766 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 KRT15P19012 456 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 EN2P19622 333 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 MGAT1P26572 445 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GARSP41250 739 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ABCG1P45844 678 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TBX4P57082 545 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 WDR5P61964 334 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 GPR17Q13304 367 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 MPP3Q13368 585 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms