RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 AP4S1Q9Y587 144 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 TCRBV3S1A0A5B6 114 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 FUOMA2VDF0 154 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 HTRA2O43464 458 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 VAPBO95292 243 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZFXP17010 805 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 CCND2P30279 289 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 RAP1GAPP47736 663 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 NR2C2P49116 596 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 SURF1Q15526 300 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 HMBOX1Q6NT76 420 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 LYSMD3Q7Z3D4 306 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 TFAP2CQ92754 450 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PGBD4Q96DM1 585 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 RBBP8Q99708 897 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 NAT9Q9BTE0 207 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PCDHGA7Q9Y5G6 932 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 GOLGA8QA0A0J9YX86 632 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 GOLGA8OA6NCC3 632 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 GOLGA8NF8WBI6 632 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 TRIM24O15164 1050 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 MLH1P40692 756 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 RPL14P50914 215 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 CRADDP78560 199 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 TRPC3Q13507 836 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 TRIM25Q14258 630 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PPP6R3Q5H9R7 873 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 CMC1Q7Z7K0 106 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 DCLK2Q8N568 766 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 RNF148Q8N7C7 305 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZNF420Q8TAQ5 688 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ITPKCQ96DU7 683 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 SNRNP25Q9BV90 132 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 CAAP1Q9H8G2 361 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 KIAA1522Q9P206 1035 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 HMGXB4Q9UGU5 601 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ITGB1BP2Q9UKP3 347 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 KPNA7A9QM74 516 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 NR3C2P08235 984 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 SUPT20HL2P0C7V6 817 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 FUT4P22083 530 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 MPSTP25325 297 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 GBE1Q04446 702 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 CAPSQ13938 189 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 FRG1Q14331 258 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 SUPT20HL1Q3ZLR7 823 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 PPP4R4Q6NUP7 873 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 TBC1D15Q8TC07 691 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 LRTOMTQ8WZ04 291 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 OGTO15294 1046 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 B4GALT4O60513 344 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 CILPO75339 1184 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 LTFP02788 710 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 CHRNGP07510 517 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 ENO3P13929 434 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 DCKP27707 260 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 HMOX2P30519 316 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 LIMK2P53671 638 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 GALNT2Q10471 571 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 FKBP1CQ5VVH2 108 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 SEL1L3Q68CR1 1132 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 ANKFN1Q8N957 763 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 IL22Q9GZX6 179 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 GBA2Q9HCG7 927 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 PICK1Q9NRD5 415 aa12.34□□□□□ -0.43
SMARCAL1-201ENST00000357276 TCP10L2B9ZVM9 353 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 DLGAP1O14490 977 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 DGKIO75912 1065 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 ATE1O95260 518 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 MPOP05164 745 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 SBK3P0C264 359 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 SLC7A1P30825 629 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 GARSP41250 739 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 ITGA7Q13683 1181 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 GPR141Q7Z602 305 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 CHPT1Q8WUD6 406 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 KHSRPQ92945 711 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 MAELQ96JY0 434 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 NEURL2Q9BR09 285 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 TBC1D23Q9NUY8 699 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 VTI1BQ9UEU0 232 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
SMARCAL1-201ENST00000357276 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms