RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 POLD3Q15054 466 aaPredicted RBP18.39■□□□□ 0.54
CDK11A-202ENST00000356937 BBS7Q8IWZ6 715 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 NAT8LQ8N9F0 302 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 BHMTQ93088 406 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 AGAP3Q96P47 875 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 CDCA3Q99618 268 aaPredicted RBP18.39■□□□□ 0.54
CDK11A-202ENST00000356937 SFXN1Q9H9B4 322 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 IPO11Q9UI26 975 aaKnown RBP18.39■□□□□ 0.54
CDK11A-202ENST00000356937 ARHGAP26Q9UNA1 814 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 SHOC2Q9UQ13 582 aa18.39■□□□□ 0.54
CDK11A-202ENST00000356937 HELZP42694 1942 aaKnown RBP18.39■□□□□ 0.53
CDK11A-202ENST00000356937 ARHGAP42A6NI28 874 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 MAP2K7O14733 419 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 NDC80O14777 642 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 MTSS1O43312 755 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 OPHN1O60890 802 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 PPFIA2O75334 1257 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 JCHAINP01591 159 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 CDH4P55283 916 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 RARS2Q5T160 578 aaKnown RBP18.39■□□□□ 0.53
CDK11A-202ENST00000356937 C4orf22Q6V702 233 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 HTR3DQ70Z44 454 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 ITFG1Q8TB96 612 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 UBLCP1Q8WVY7 318 aaPredicted RBP18.39■□□□□ 0.53
CDK11A-202ENST00000356937 ZSWIM3Q96MP5 696 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 TSGA13Q96PP4 275 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 HPCAL4Q9UM19 191 aa18.39■□□□□ 0.53
CDK11A-202ENST00000356937 TMEM63AO94886 807 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 APRTP07741 180 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 POU2F2P09086 479 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 TCEAL5Q5H9L2 206 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 MREGQ8N565 214 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 ZCCHC9Q8N567 271 aaKnown RBP18.38■□□□□ 0.53
CDK11A-202ENST00000356937 USP13Q92995 863 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-202ENST00000356937 TDP1Q9NUW8 608 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 C2orf16Q68DN1 1984 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 TBL1XO60907 577 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 CLDN11O75508 207 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 CCNB1P14635 433 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 ACVRL1P37023 503 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 HSD17B3P37058 310 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 KCNJ11Q14654 390 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 TEX44Q53QW1 395 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 HOOK3Q86VS8 718 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 TMA16Q96EY4 203 aaKnown RBP18.38■□□□□ 0.53
CDK11A-202ENST00000356937 TXLNGYQ9BZA5 131 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 ZNF576Q9H609 170 aa18.38■□□□□ 0.53
CDK11A-202ENST00000356937 PRRC2BQ5JSZ5 2229 aaKnown RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 A0A1B0GVM2 712 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 TCAF2A6NFQ2 919 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 E7EVH7 732 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 LINC01565O15544 149 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZBTB24O43167 697 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ATP8B1O43520 1251 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZNF189O75820 626 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 PRAMEF12O95522 483 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 PSMB4P28070 264 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 PMS2P54278 862 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZNF33AQ06730 810 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 HYAL1Q12794 435 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZNF177Q13360 481 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 MTM1Q13496 603 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 SLMAPQ14BN4 828 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 TIGD7Q6NT04 549 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 POTEHQ6S545 545 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 LRRC49Q8IUZ0 686 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 OR52K2Q8NGK3 314 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 RBM15Q96T37 977 aaKnown RBP eCLIP18.37■□□□□ 0.534e-6■■■■□ 22.2
CDK11A-202ENST00000356937 TSPYL1Q9H0U9 437 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 NSUN3Q9H649 340 aaKnown RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZNF510Q9Y2H8 683 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 TTLL3Q9Y4R7 772 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 A0A0D9SEW6 157 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 J3KR12 359 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 MATN3O15232 486 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 CHADO15335 359 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 GLP2RO95838 553 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 UAP1Q16222 522 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 PARP15Q460N3 678 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 ZSCAN18Q8TBC5 510 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-202ENST00000356937 SEMA4AQ9H3S1 761 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 SP110Q9HB58 689 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 CDH22Q9UJ99 828 aa18.37■□□□□ 0.53
CDK11A-202ENST00000356937 TYW5A2RUC4 315 aaKnown RBP18.36■□□□□ 0.53
CDK11A-202ENST00000356937 FDFT1P37268 417 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 LMAN1P49257 510 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 YBEYP58557 167 aaPredicted RBP18.36■□□□□ 0.53
CDK11A-202ENST00000356937 HP1BP3Q5SSJ5 553 aaPredicted RBP18.36■□□□□ 0.53
CDK11A-202ENST00000356937 TPGS1Q6ZTW0 290 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 CARNMT1Q8N4J0 409 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 TDRD5Q8NAT2 981 aaKnown RBP18.36■□□□□ 0.53
CDK11A-202ENST00000356937 PABPC5Q96DU9 382 aaKnown RBP18.36■□□□□ 0.53
CDK11A-202ENST00000356937 RSPH14Q9UHP6 348 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 C5orf42Q9H799 3197 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 SZT2Q5T011 3432 aa18.36■□□□□ 0.53
CDK11A-202ENST00000356937 RHOCP08134 193 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms