RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SYCE1Q8N0S2 351 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 IL17RCQ8NAC3 791 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 TXNDC5Q8NBS9 432 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 PCDH19Q8TAB3 1148 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 RPL10LQ96L21 214 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 PSMB7Q99436 277 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 KLC2Q9H0B6 622 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 CHRDQ9H2X0 955 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 CACNA2D2Q9NY47 1150 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 DDX56Q9NY93 547 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 AMFRQ9UKV5 643 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 STARD13Q9Y3M8 1113 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 DCLK1O15075 740 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 ZSCAN12O43309 604 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 CTNNA1P35221 906 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 RPS9P46781 194 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 STK19P49842 368 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF135P52742 658 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 POLD3Q15054 466 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 EIF4HQ15056 248 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 PTPRNQ16849 979 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 IL31Q6EBC2 164 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 LINGO4Q6UY18 593 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 CHPFQ8IZ52 775 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 ALG3Q92685 438 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 TTC17Q96AE7 1141 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 HMCESQ96FZ2 354 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF670Q9BS34 389 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 ATP13A1Q9HD20 1204 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 PCDHA3Q9Y5H8 950 aa18.32■□□□□ 0.52
PDLIM7-202ENST00000355841 PRR33A8MZF0 331 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 CBX4O00257 560 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 TIMM44O43615 452 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ATP5BP06576 529 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 DLDP09622 509 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 AVPR2P30518 371 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 PLK1P53350 603 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 OXCT1P55809 520 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 SLC12A1Q13621 1099 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 DMC1Q14565 340 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF234Q14588 700 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF354CQ86Y25 554 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 KATNAL2Q8IYT4 538 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 C17orf53Q8N3J3 647 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 SYNPOQ8N3V7 929 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 PQLC3Q8N755 202 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 UCMAQ8WVF2 138 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ARHGEF2Q92974 986 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 C1QTNF1Q9BXJ1 281 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 SLC39A8Q9C0K1 460 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 RCOR3Q9P2K3 495 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 VPS51Q9UID3 782 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 SLCO3A1Q9UIG8 710 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 PLA2G4CQ9UP65 541 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ACTL7AQ9Y615 435 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 RASA4BC9J798 803 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 SGK1O00141 431 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 RASA4O43374 803 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ADAM23O75077 832 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 MAP3K6O95382 1288 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 MT-CO1P00395 513 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 KRT10P13645 584 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 HLA-EP13747 358 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 CTNNA2P26232 953 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 IL12RB1P42701 662 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 PEX5P50542 639 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 MRPS21P82921 87 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ECT2LQ008S8 904 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 FNDC3BQ53EP0 1204 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 AADACL2Q6P093 401 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 CCDC50Q8IVM0 306 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 UMODL1-AS1Q8N2C9 162 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 FAF2Q96CS3 445 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 MRGPRX3Q96LB0 322 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 MTG2Q9H4K7 406 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 RETREG1Q9H6L5 497 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 LRRC19Q9H756 370 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 THAP10Q9P2Z0 257 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 ERVW-1Q9UQF0 538 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 RAD54BQ9Y620 910 aa18.31■□□□□ 0.52
PDLIM7-202ENST00000355841 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 DFFAO00273 331 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 ZRANB2O95218 330 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■□□ 18.6
PDLIM7-202ENST00000355841 KAZNQ674X7 775 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 NCBP2-AS2Q69YL0 99 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 SPOCD1Q6ZMY3 1216 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 ARHGAP12Q8IWW6 846 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 RNF157Q96PX1 679 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 ALS2CR12Q96Q35 445 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 LRFN3Q9BTN0 628 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 MAGEH1Q9H213 219 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 SPATA6Q9NWH7 488 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 STON1Q9Y6Q2 735 aa18.3■□□□□ 0.52
PDLIM7-202ENST00000355841 K7ERQ8 282 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 DDX3YO15523 660 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms