RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 AGAP3Q96P47 875 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 ADAMTS10Q9H324 1103 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 NXF3Q9H4D5 531 aaKnown RBP25.03■■□□□ 1.6
CPNE1-202ENST00000352393 TUT1Q9H6E5 874 aaKnown RBP25.03■■□□□ 1.6
CPNE1-202ENST00000352393 NMRAL1Q9HBL8 299 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 DMAP1Q9NPF5 467 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-202ENST00000352393 SETD4Q9NVD3 440 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 COX16Q9P0S2 106 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 PRPF19Q9UMS4 504 aaKnown RBP25.03■■□□□ 1.6
CPNE1-202ENST00000352393 SLC4A7Q9Y6M7 1214 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 C2P06681 752 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 ABCG1P45844 678 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 CSRP3P50461 194 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 CSE1LP55060 971 aaKnown RBP25.03■■□□□ 1.6
CPNE1-202ENST00000352393 MMEL1Q495T6 779 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 RASIP1Q5U651 963 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 OXSMQ9NWU1 459 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 STK39Q9UEW8 545 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 KCNH4Q9UQ05 1017 aa25.03■■□□□ 1.6
CPNE1-202ENST00000352393 M0QYT0 321 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 TIMM44O43615 452 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 PABPC4LP0CB38 370 aaKnown RBP25.02■■□□□ 1.6
CPNE1-202ENST00000352393 YY1P25490 414 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 PIK3R1P27986 724 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 FBXL19Q6PCT2 694 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 ZNF560Q96MR9 790 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 SLC2A13Q96QE2 648 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 PIGVQ9NUD9 493 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 STAP1Q9ULZ2 295 aa25.02■■□□□ 1.6
CPNE1-202ENST00000352393 ADM5C9JUS6 153 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 MATN2O00339 956 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 AP1G1O43747 822 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 CD1EP15812 388 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 MPSTP25325 297 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 MPP3Q13368 585 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 PDK3Q15120 406 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 HSP90AA5PQ58FG0 334 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 UGT2A3Q6UWM9 527 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 CATSPER4Q7RTX7 472 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 GPC2Q8N158 579 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 MFSD3Q96ES6 412 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 VTA1Q9NP79 307 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 C6orf203Q9P0P8 240 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-202ENST00000352393 MID2Q9UJV3 735 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 PSMD13Q9UNM6 376 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 RAD54BQ9Y620 910 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 RBM47A0AV96 593 aaKnown RBP25.01■■□□□ 1.59
CPNE1-202ENST00000352393 AP1G2O75843 785 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 THRAP10827 490 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 CYP2B6P20813 491 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 IREB2P48200 963 aaKnown RBP25.01■■□□□ 1.59
CPNE1-202ENST00000352393 SYPL2Q5VXT5 272 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 KCNMB4Q86W47 210 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 PQLC1Q8N2U9 271 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 ACVR1CQ8NER5 493 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 WNT8BQ93098 351 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 HNRNPABQ99729 332 aaKnown RBP25.01■■□□□ 1.59
CPNE1-202ENST00000352393 MLPHQ9BV36 600 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-202ENST00000352393 DUSP16Q9BY84 665 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 INPP5FQ9Y2H2 1132 aa25.01■■□□□ 1.59
CPNE1-202ENST00000352393 ANKRD33BA6NCL7 494 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 ERI2A8K979 691 aaKnown RBP25■■□□□ 1.59
CPNE1-202ENST00000352393 FAM72CH0Y354 149 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 FBXO21O94952 628 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 RTN3O95197 1032 aaPredicted RBP25■■□□□ 1.59
CPNE1-202ENST00000352393 CD4P01730 458 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 CHRNGP07510 517 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 SERPINB5P36952 375 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 NUDT2P50583 147 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 PPIDQ08752 370 aaKnown RBP25■■□□□ 1.59
CPNE1-202ENST00000352393 SEMA3BQ13214 749 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 SNAPC2Q13487 334 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 GRAMD1BQ3KR37 738 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 FAM72AQ5TYM5 149 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 FAM72DQ6L9T8 149 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 NOTUMQ6P988 496 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 FAM72BQ86X60 149 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 DNAAF3Q8N9W5 541 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 ICA1LQ8NDH6 482 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 SHCBP1Q8NEM2 672 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 APPL2Q8NEU8 664 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 PIP4K2CQ8TBX8 421 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 RDH11Q8TC12 318 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 AGR3Q8TD06 166 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 VPS39Q96JC1 886 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 HAPLN3Q96S86 360 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 ILKAPQ9H0C8 392 aaPredicted RBP25■■□□□ 1.59
CPNE1-202ENST00000352393 GBA3Q9H227 469 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 RAP2CQ9Y3L5 183 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 DTNAQ9Y4J8 743 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 APOA4P06727 396 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 ERCC2P18074 760 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 CD68P34810 354 aaPredicted RBP25■■□□□ 1.59
CPNE1-202ENST00000352393 ALDH1A3P47895 512 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 CHN2P52757 468 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 HK2P52789 917 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 NME3Q13232 169 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 DYNC1I2Q13409 638 aaKnown RBP25■■□□□ 1.59
CPNE1-202ENST00000352393 C16orf89Q6UX73 402 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 ZYG11AQ6WRX3 759 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms