RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 C2CD2LO14523 706 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 MATN3O15232 486 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 ATP5HO75947 161 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 CCNB1P14635 433 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 BGNP21810 368 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 FGFR3P22607 806 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 GP5P40197 560 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 TUBP50607 506 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 NCALDP61601 193 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 DBN1Q16643 649 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 ANKRD20A4Q4UJ75 823 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 ATG16L1Q676U5 607 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 TIGD7Q6NT04 549 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-201ENST00000350028 KYAT3Q6YP21 454 aaKnown RBP17.05■□□□□ 0.32
SAMM50-201ENST00000350028 CEP57Q86XR8 500 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 CNTD1Q8N815 330 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 ZNF669Q96BR6 464 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-201ENST00000350028 SLC39A13Q96H72 371 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 FCRL3Q96P31 734 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-201ENST00000350028 CASD1Q96PB1 797 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 LRRC37BQ96QE4 947 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 FCRL5Q96RD9 977 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 CPNE1Q99829 537 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 BEGAINQ9BUH8 593 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 IL22Q9GZX6 179 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 COMMD8Q9NX08 183 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 OSER1Q9NX31 292 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 LRFN2Q9ULH4 789 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 HS3ST4Q9Y661 456 aa17.05■□□□□ 0.32
SAMM50-201ENST00000350028 FAM92AA1XBS5 289 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 BIRC5O15392 142 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 HOXA2O43364 376 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 MAFKO60675 156 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 USP12O75317 370 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ANXA9O76027 345 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 RTN3O95197 1032 aaPredicted RBP17.04■□□□□ 0.32
SAMM50-201ENST00000350028 GPR15P49685 360 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 TBX4P57082 545 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 SMARCB1Q12824 385 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 CDH17Q12864 832 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ELAVL2Q12926 359 aaKnown RBP17.04■□□□□ 0.32
SAMM50-201ENST00000350028 OLIG2Q13516 323 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 SPDYAQ5MJ70 313 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ARTNQ5T4W7 220 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 FAM126BQ8IXS8 530 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 RTL3Q8N8U3 475 aaKnown RBP17.04■□□□□ 0.32
SAMM50-201ENST00000350028 STKLD1Q8NE28 680 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ARMC2Q8NEN0 867 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 NPHS2Q9NP85 383 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 OLA1Q9NTK5 396 aaKnown RBP17.04■□□□□ 0.32
SAMM50-201ENST00000350028 CLIC5Q9NZA1 410 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 CHKBQ9Y259 395 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 H7C4K7 107 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 GLRA3O75311 464 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 MOCS2O96007 188 aaPredicted RBP17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ITGA2BP08514 1039 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ERVK-10P10266 1014 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 YWHAQP27348 245 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 PSEN1P49768 467 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 GPNMBQ14956 572 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 CES3Q6UWW8 571 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 USP33Q8TEY7 942 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ATP2A3Q93084 1043 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 PGLYRP2Q96PD5 576 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 OXCT2Q9BYC2 517 aaPredicted RBP17.04■□□□□ 0.32
SAMM50-201ENST00000350028 MYLK2Q9H1R3 596 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 GLOD4Q9HC38 313 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 KLC4Q9NSK0 619 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 TXLNGQ9NUQ3 528 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 DONSONQ9NYP3 566 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 GMIPQ9P107 970 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 SIRPGQ9P1W8 387 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 DCDC2Q9UHG0 476 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 SOX13Q9UN79 622 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 VWA8A3KMH1 1905 aa17.04■□□□□ 0.32
SAMM50-201ENST00000350028 ZCWPW2A0A1B0GU75 182 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 HNRNPH1P31943 449 aaKnown RBP17.03■□□□□ 0.32
SAMM50-201ENST00000350028 SPRP35270 261 aaPredicted RBP17.03■□□□□ 0.32
SAMM50-201ENST00000350028 SLC11A1P49279 550 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 GEMP55040 296 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 PDE1BQ01064 536 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 SLC20A2Q08357 652 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 INSCQ1MX18 579 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 CERCAMQ5T4B2 595 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 ARHGAP36Q6ZRI8 547 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 NLRP9Q7RTR0 991 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 OTOP3Q7RTS5 596 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 C14orf80Q86SX3 495 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 NUDCD3Q8IVD9 361 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 ATP6V0D2Q8N8Y2 350 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 ATAD1Q8NBU5 361 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 GPR62Q9BZJ7 368 aa17.03■□□□□ 0.32
SAMM50-201ENST00000350028 TRIM17Q9Y577 477 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms