RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 TRPA1O75762 1119 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 BEST1O76090 585 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 ALDH1A2O94788 518 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 UQCRBP14927 111 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 NAGLUP54802 743 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 PDK3Q15120 406 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMTN-202ENST00000347557 SIX6OS1Q8N1H7 587 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 FAM156AQ8NDB6 213 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 URGCPQ8TCY9 931 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 ACTRT2Q8TDY3 377 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 SREK1Q8WXA9 508 aaKnown RBP14.89□□□□□ -0.03
SMTN-202ENST00000347557 OMDQ99983 421 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 GATA5Q9BWX5 397 aaPredicted RBP14.89□□□□□ -0.03
SMTN-202ENST00000347557 CDH19Q9H159 772 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 VCX3BQ9H321 246 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 NMRAL1Q9HBL8 299 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 APPL1Q9UKG1 709 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 TLK1Q9UKI8 766 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 FZD10Q9ULW2 581 aa14.89□□□□□ -0.03
SMTN-202ENST00000347557 DOCK1Q14185 1865 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 ZBTB24O43167 697 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 CCNT2O60583 730 aaKnown RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 MATKP42679 507 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 SERPINB8P50452 374 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 CDK7P50613 346 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 FOLH1Q04609 750 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 ARHGAP1Q07960 439 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 ZNF460Q14592 562 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 MYBPC3Q14896 1274 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 FBXO47Q5MNV8 452 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 STEAP4Q687X5 459 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 IL31Q6EBC2 164 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 AAGABQ6PD74 315 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 PTAR1Q7Z6K3 402 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 APLFQ8IW19 511 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 TTC39CQ8N584 583 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 TMA16Q96EY4 203 aaKnown RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 CNBD2Q96M20 576 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 TSNARE1Q96NA8 513 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 APBA2Q99767 749 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 CPNE1Q99829 537 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 COPS7BQ9H9Q2 264 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 DDX43Q9NXZ2 648 aaKnown RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 GJD2Q9UKL4 321 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 FZD9O00144 591 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 TRIM13O60858 407 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 MPP3Q13368 585 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 IYDQ6PHW0 289 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 LRRC40Q9H9A6 602 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 LCTP09848 1927 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 KPNA7A9QM74 516 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 PIGNO95427 931 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 ERCC2P18074 760 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 ALDH1A3P47895 512 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 BTKQ06187 659 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 SFSWAPQ12872 951 aaKnown RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 USP10Q14694 798 aaKnown RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 GRIK4Q16099 956 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 GRTP1Q5TC63 336 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 C9orf57Q5W0N0 161 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 APPL2Q8NEU8 664 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 RCN3Q96D15 328 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 LRGUKQ96M69 825 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 OLFM3Q96PB7 478 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 RBBP8Q99708 897 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 SPATA16Q9BXB7 569 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 ILKAPQ9H0C8 392 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
SMTN-202ENST00000347557 TIMM13Q9Y5L4 95 aaPredicted RBP14.88□□□□□ -0.03
SMTN-202ENST00000347557 SLC25A27O95847 323 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 MLNP12872 115 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 GRM5P41594 1212 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 FLOT2Q14254 428 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 CNGA3Q16281 694 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 FAM187BQ17R55 369 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 ACAD11Q709F0 780 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 KCNMB4Q86W47 210 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 ZSCAN18Q8TBC5 510 aaPredicted RBP14.87□□□□□ -0.03
SMTN-202ENST00000347557 EDEM1Q92611 657 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 KCNK16Q96T55 309 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 PIGVQ9NUD9 493 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 PIN4Q9Y237 131 aaKnown RBP14.87□□□□□ -0.03
SMTN-202ENST00000347557 PCDHB12Q9Y5F1 795 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 SF3B1O75533 1304 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMTN-202ENST00000347557 ZNF195O14628 629 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 JCHAINP01591 159 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 IGFBP6P24592 240 aaPredicted RBP14.87□□□□□ -0.03
SMTN-202ENST00000347557 PIK3R1P27986 724 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 TPI1P60174 286 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 SLC25A52Q3SY17 297 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 ANKRD20A4Q4UJ75 823 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 NOL9Q5SY16 702 aaKnown RBP14.87□□□□□ -0.03
SMTN-202ENST00000347557 FBXL19Q6PCT2 694 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 RNF135Q8IUD6 432 aa14.87□□□□□ -0.03
SMTN-202ENST00000347557 ZDHHC17Q8IUH5 632 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms