RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 ZNF567Q8N184 647 aa14.22□□□□□ -0.13
PMS1-201ENST00000342075 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
PMS1-201ENST00000342075 MSLNLQ96KJ4 702 aa14.22□□□□□ -0.13
PMS1-201ENST00000342075 KXD1Q9BQD3 176 aa14.22□□□□□ -0.13
PMS1-201ENST00000342075 SPON2Q9BUD6 331 aa14.22□□□□□ -0.13
PMS1-201ENST00000342075 PIH1D1Q9NWS0 290 aaKnown RBP14.22□□□□□ -0.13
PMS1-201ENST00000342075 H0Y626 953 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 RAMP2O60895 175 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 BANF1O75531 89 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 PAPLNO95428 1278 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 POU2F2P09086 479 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 PTPN3P26045 913 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 DDX6P26196 483 aaKnown RBP eCLIP14.21□□□□□ -0.13
PMS1-201ENST00000342075 WEE1P30291 646 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 ETFBP38117 255 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 BASP1P80723 227 aaKnown RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 MESP2Q0VG99 397 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 C5orf22Q49AR2 442 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 LINGO4Q6UY18 593 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 CDKL3Q8IVW4 592 aaPredicted RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 UMODL1-AS1Q8N2C9 162 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 FGF14Q92915 247 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 PABPC5Q96DU9 382 aaKnown RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 UBP1Q9NZI7 540 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 WASH4PA8MWX3 477 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 PPP1R12AO14974 1030 aaPredicted RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 SNAP91O60641 907 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 JCHAINP01591 159 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 ARSAP15289 507 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 GBP2P32456 591 aaPredicted RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 CHKAP35790 457 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 ANO4Q32M45 955 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 LY6G5CQ5SRR4 150 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 HP1BP3Q5SSJ5 553 aaPredicted RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 IZUMO3Q5VZ72 239 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 ASTLQ6HA08 431 aaPredicted RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 WDR93Q6P2C0 686 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 FAM217AQ8IXS0 508 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 SEC14L1Q92503 715 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 AZIN2Q96A70 460 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 HDAC11Q96DB2 347 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 ZDHHC18Q9NUE0 388 aa14.21□□□□□ -0.13
PMS1-201ENST00000342075 IPO11Q9UI26 975 aaKnown RBP14.21□□□□□ -0.13
PMS1-201ENST00000342075 A0A1B0GVM2 712 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 TCAF2A6NFQ2 919 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 KCNA5P22460 613 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 CDH4P55283 916 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 MAXP61244 160 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 XRCC4Q13426 336 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ANKRD20A2Q5SQ80 823 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ATAT1Q5SQI0 421 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ANKRD20A1Q5TYW2 823 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ANKRD20A3Q5VUR7 823 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 FYB2Q5VWT5 728 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 RNF219Q5W0B1 726 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 PARM1Q6UWI2 310 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 IFT20Q8IY31 132 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 APCDD1Q8J025 514 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 CNTD1Q8N815 330 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 GORASP1Q9BQQ3 440 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 RAB17Q9H0T7 212 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 EBF3Q9H4W6 596 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 PCDH9Q9HC56 1237 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 USP34Q70CQ2 3546 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 E2F8A0AVK6 867 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 HEPACAM2A8MVW5 462 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ZBTB24O43167 697 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 TMEM63AO94886 807 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 PEX11BO96011 259 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 BMP1P13497 986 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 H2AFXP16104 143 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 CD70P32970 193 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 CD68P34810 354 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 ZNF135P52742 658 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 SLC10A7Q0GE19 358 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 CES5AQ6NT32 575 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 OTOP3Q7RTS5 596 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 RNF135Q8IUD6 432 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 CCDC13Q8IYE1 715 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 SMARCD2Q92925 531 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ARHGEF2Q92974 986 aaKnown RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 CDX2Q99626 313 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 RAB6BQ9NRW1 208 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 DENND4AQ7Z401 1863 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 ANTXRLA6NF34 631 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 RHOCP08134 193 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 PSMB4P28070 264 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 CSKP41240 450 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 GRIA1P42261 906 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 GNA12Q03113 381 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ZNF177Q13360 481 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 CDH18Q13634 790 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 IL31Q6EBC2 164 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 MFN1Q8IWA4 741 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ADGRG2Q8IZP9 1017 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 SMRP1Q8NCR6 262 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms