RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PEBP4Q96S96 227 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 NPAS2Q99743 824 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 UNKQ9C0B0 810 aaKnown RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 HAPLN2Q9GZV7 340 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 DBNDD1Q9H9R9 158 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 AGO4Q9HCK5 861 aaKnown RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ATAD3AQ9NVI7 634 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 CYTH4Q9UIA0 394 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PSAT1Q9Y617 370 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 TCRBV3S1A0A5B6 114 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 NEMP1O14524 444 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 GCATO75600 419 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 MX2P20592 715 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 CHRNA5P30532 468 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ADSLP30566 484 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 SLC7A1P30825 629 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 GNA12Q03113 381 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 GRSF1Q12849 480 aaKnown RBP eCLIP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 NFATC3Q12968 1075 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF394Q53GI3 561 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 C6orf183Q5T699 404 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 TMEM198Q66K66 360 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 STEAP4Q687X5 459 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 FAM117BQ6P1L5 589 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 DENND1BQ6P3S1 775 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 CYP4V2Q6ZWL3 525 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ZBTB46Q86UZ6 589 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 IGFN1Q86VF2 1251 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ZC3H7AQ8IWR0 971 aaKnown RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 SIX6OS1Q8N1H7 587 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PLD6Q8N2A8 252 aaKnown RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PQLC3Q8N755 202 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PLD5Q8N7P1 536 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ANKFN1Q8N957 763 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 TAMM41Q96BW9 452 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 TMA16Q96EY4 203 aaKnown RBP9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PPP1R36Q96LQ0 422 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 OLFM1Q99784 485 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 IMPG2Q9BZV3 1241 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 ANKEF1Q9NU02 776 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 SMOXQ9NWM0 555 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 PCDHGA7Q9Y5G6 932 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 SLX4Q8IY92 1834 aa9.59□□□□□ -0.87
NECAP1-201ENST00000339754 NRXN2Q9P2S2 1712 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 COL11A2P13942 1736 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 E2F8A0AVK6 867 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TMEM114B3SHH9 223 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 GRID2O43424 1007 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 IL4RP24394 825 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MLLT10P55197 1068 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TCP10Q12799 353 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TRAF2Q12933 501 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PTK2BQ14289 1009 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ZNF354CQ86Y25 554 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CADM3Q8N126 398 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CNTD1Q8N815 330 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MFSD2AQ8NA29 543 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TERB1Q8NA31 727 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 SLC4A11Q8NBS3 891 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 IL31RAQ8NI17 732 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PTCD2Q8WV60 388 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MOCOSQ96EN8 888 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 NSMCE3Q96MG7 304 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ZNF641Q96N77 438 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PSD2Q9BQI7 771 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 NANOGQ9H9S0 305 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ZBTB26Q9HCK0 441 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 SACM1LQ9NTJ5 587 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 C20orf96Q9NUD7 363 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PI4KBQ9UBF8 816 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 SUCOQ9UBS9 1254 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 NOX1Q9Y5S8 564 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ADAMTSL1Q8N6G6 1762 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 BCLAF3A2AJT9 711 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PIK3R2O00459 728 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PFDN6O15212 129 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 HDAC3O15379 428 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MAFGO15525 162 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 NDUFB5O43674 189 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CHRNGP07510 517 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 BMP2P12643 396 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MPSTP25325 297 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TYK2P29597 1187 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 GNL1P36915 607 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CACNB3P54284 484 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CDH6P55285 790 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PSMC1P62191 440 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TNK2Q07912 1038 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 SEPT6Q14141 434 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TFDP2Q14188 446 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TRIM16LQ309B1 348 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms