RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 TLL2Q9Y6L7 1015 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ATP6AP2A0A1C7CYW4 349 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 ATP6AP2O75787 350 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 CDH15P55291 814 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 CEACAM7Q14002 265 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 CYLC2Q14093 348 aaPredicted RBP16.46■□□□□ 0.23
SCARB1-202ENST00000339570 MYLK3Q32MK0 819 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 FAM91A1Q658Y4 838 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 KYQ8NBH2 561 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 FAM81AQ8TBF8 368 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 URGCPQ8TCY9 931 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 TRPM4Q8TD43 1214 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 EXT2Q93063 718 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 TMIGD2Q96BF3 282 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 ZNF512Q96ME7 567 aaPredicted RBP16.46■□□□□ 0.23
SCARB1-202ENST00000339570 SLC39A3Q9BRY0 314 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 VANGL2Q9ULK5 521 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 TNFSF13BQ9Y275 285 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 CDY2AQ9Y6F7 541 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 CDY1Q9Y6F8 540 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 MGAMO43451 1857 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 IGKV6D-21A0A0A0MT36 114 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 ZNF195O14628 629 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 GRK2P25098 689 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 DPP6P42658 865 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 NIPAL4Q0D2K0 466 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 LSAMPQ13449 338 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 SEMA5AQ13591 1074 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 PGM2L1Q6PCE3 622 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 SLC41A1Q8IVJ1 513 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 MYO1HQ8N1T3 1032 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 ZFP28Q8NHY6 868 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 ILKAPQ9H0C8 392 aaPredicted RBP16.46■□□□□ 0.23
SCARB1-202ENST00000339570 WDR41Q9HAD4 459 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 SNX13Q9Y5W8 968 aa16.46■□□□□ 0.23
SCARB1-202ENST00000339570 TRIM13O60858 407 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TFAP2AP05549 437 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 MAPK10P53779 464 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 MTTPP55157 894 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 GRM3Q14832 879 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 POU6F1Q14863 301 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 DGKDQ16760 1214 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 SYPL2Q5VXT5 272 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TRIML2Q8N7C3 387 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 RNF139Q8WU17 664 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 FAM167AQ96KS9 214 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 FRMD8Q9BZ67 464 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 COMMD3-BMI1R4GMX3 469 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 CROCCQ5TZA2 2017 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 ZBTB7AO95365 584 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 IL1BP01584 269 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TPSB2P20231 275 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TPSAB1Q15661 275 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 SEL1L3Q68CR1 1132 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 HFE2Q6ZVN8 426 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 KBTBD6Q86V97 674 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 SLC7A14Q8TBB6 771 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TSNARE1Q96NA8 513 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 ACE2Q9BYF1 805 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 CCDC167Q9P0B6 97 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 KCNU1A8MYU2 1149 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 PROZP22891 400 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 IGFBP6P24592 240 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 NMBRP28336 390 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 SPRP35270 261 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 MAGEA3P43357 314 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 MPP3Q13368 585 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 EIF2AQ9BY44 585 aaKnown RBP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 BFARQ9NZS9 450 aa16.45■□□□□ 0.22
SCARB1-202ENST00000339570 TIMM13Q9Y5L4 95 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-202ENST00000339570 ZBTB24O43167 697 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 SMIM18P0DKX4 95 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 GRM1Q13255 1194 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 DENND6AQ8IWF6 608 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 EDEM1Q92611 657 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 ZBED3Q96IU2 234 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 SLC45A3Q96JT2 553 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 KLHL32Q96NJ5 620 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 DCUN1D5Q9BTE7 237 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 GCOM2Q9BZD3 368 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 DNAJC28Q9NX36 388 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 ANKRD33BA6NCL7 494 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 EEF2KO00418 725 aaKnown RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 PABPC4LP0CB38 370 aaKnown RBP16.44■□□□□ 0.22
SCARB1-202ENST00000339570 FAM200BP0CF97 657 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 ICAM3P32942 547 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 MYBPC1Q00872 1141 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 MAP3K21Q5TCX8 1036 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 IL23RQ5VWK5 629 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 EPGNQ6UW88 154 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 KCNMB4Q86W47 210 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 FAM110BQ8TC76 370 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 SLC35F5Q8WV83 523 aa16.44■□□□□ 0.22
SCARB1-202ENST00000339570 JADE3Q92613 823 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms