RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 GRAMD4Q6IC98 578 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 EME1Q96AY2 570 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 HES6Q96HZ4 224 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 VRTNQ9H8Y1 702 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 GOLGB1Q14789 3259 aaKnown RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 TTC36A6NLP5 189 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 SRRM3A6NNA2 597 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 SOAT2O75908 522 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 CREB1P16220 341 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 RPA3P35244 121 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MAMLD1Q13495 774 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 BMPR2Q13873 1038 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MORF4L2Q15014 288 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 PDCD2Q16342 344 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 PPIL6Q8IXY8 311 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 SDCCAG3Q96C92 435 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 DNMT3LQ9UJW3 386 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MYH10P35580 1976 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 HCRTO43612 131 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 NUDT17P0C025 328 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 EEF1DP29692 281 aaKnown RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 ST8SIA6P61647 398 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 RAD51Q06609 339 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF235Q14590 738 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 TRIM71Q2Q1W2 868 aaKnown RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 C15orf59Q2T9L4 293 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MYLK4Q86YV6 388 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 CDKL3Q8IVW4 592 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 POU5F2Q8N7G0 328 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF75CPQ92670 426 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 SDCBP2Q9H190 292 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 THG1LQ9NWX6 298 aaKnown RBP12.06□□□□□ -0.48
HDAC6-201ENST00000334136 PCDHA3Q9Y5H8 950 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 GPR17Q13304 367 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 C15orf39Q6ZRI6 1047 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 RTN4RL1Q86UN2 441 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF461Q8TAF7 563 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 TTC8Q8TAM2 541 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 ACTL9Q8TC94 416 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 PABPC5Q96DU9 382 aaKnown RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 CNBD2Q96M20 576 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 DCLK3Q9C098 648 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 NKX2-4Q9H2Z4 354 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 FCHO1O14526 889 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 GNGT2O14610 69 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 PSTPIP1O43586 416 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 RASSF9O75901 435 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 RB1P06400 928 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 CCNHP51946 323 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 CCNG2Q16589 344 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 LRRC74BQ6ZQY2 392 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 PID1Q7Z2X4 250 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 TTC30AQ86WT1 665 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 DRC3Q9H069 523 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 DNPEPQ9ULA0 475 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 AURKCQ9UQB9 309 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 PRRC2BQ5JSZ5 2229 aaKnown RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 PER2O15055 1255 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 SP100P23497 879 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 ACAP1Q15027 740 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 ZC3H12AQ5D1E8 599 aaKnown RBP12.05□□□□□ -0.48
HDAC6-201ENST00000334136 TMC5Q6UXY8 1006 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 ATPAF2Q8N5M1 289 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
HDAC6-201ENST00000334136 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 MIPP30301 263 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 PEX5P50542 639 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 RPL7AP62424 266 aaKnown RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 PDK2Q15119 407 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 MAB21L3Q8N8X9 362 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 LMO3Q8TAP4 145 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 NDRG1Q92597 394 aaKnown RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TBCBQ99426 244 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 GMIPQ9P107 970 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 SAE1Q9UBE0 346 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 EME2A4GXA9 379 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 KRT36O76013 467 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 ERBB2P04626 1255 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 ETS1P14921 441 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 PTPN2P17706 415 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 COPAP53621 1224 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 NKX3-2P78367 333 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 CLDN10P78369 228 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 SMAD3P84022 425 aaKnown RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 INCA1Q0VD86 236 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TMEM130Q8N3G9 435 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms