RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 HLA-DPA1P20036 260 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 MAPK1P28482 360 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 FLT3P36888 993 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 TM4SF4P48230 202 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 DRG2P55039 364 aaKnown RBP11.43□□□□□ -0.58
POLR1B-202ENST00000333990 TGM3Q08188 693 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 DNAJC3Q13217 504 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 TRIM60Q495X7 471 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 MCOLN3Q8TDD5 553 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 CMTM5Q96DZ9 223 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 ARHGAP39Q9C0H5 1083 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 NPHS2Q9NP85 383 aa11.43□□□□□ -0.58
POLR1B-202ENST00000333990 MARCOQ9UEW3 520 aaPredicted RBP11.43□□□□□ -0.58
POLR1B-202ENST00000333990 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 MDM4O15151 490 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 TM9SF1O15321 606 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 MTA2O94776 668 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 NFKB1P19838 968 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PSMB4P28070 264 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 DAOAP59103 153 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ATP13A4Q4VNC1 1196 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PMF1Q6P1K2 205 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 MON1BQ7L1V2 547 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CRYBG2Q8N1P7 616 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ARNTL2Q8WYA1 636 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 OR8D1Q8WZ84 308 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ANKRD7Q92527 254 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 TM6SF2Q9BZW4 377 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 BCAS3Q9H6U6 928 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.42□□□□□ -0.586e-6■■■■□ 19.4
POLR1B-202ENST00000333990 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 MYH1P12882 1939 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 E2F8A0AVK6 867 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CFAP73A6NFT4 308 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 RAD51BO15315 384 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 APODP05090 189 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 FGF1P05230 155 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PBLDP30039 288 aaPredicted RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CORO1AP31146 461 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 L1CAMP32004 1257 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 SCNN1AP37088 669 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 JAM2P57087 298 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 GPM6BQ13491 265 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PLCL1Q15111 1095 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 RRM2BQ7LG56 351 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 MAGEC3Q8TD91 643 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 EPS8L3Q8TE67 593 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 GID8Q9NWU2 228 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 AGO1Q9UL18 857 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 WDR27A2RRH5 827 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 KPNA5O15131 536 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ACSL4O60488 711 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CPA3P15088 417 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CD86P42081 329 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CUL3Q13618 768 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CSHL1Q14406 222 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 DNAL1Q4LDG9 190 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 HGSNATQ68CP4 663 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ALLCQ8N6M5 410 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ZNF333Q96JL9 665 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 YIPF2Q9BWQ6 316 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 APOBEC3GQ9HC16 384 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 EIF3LQ9Y262 564 aaKnown RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ADGRA3Q8IWK6 1321 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 A0A1B0GVM2 712 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 TCAF2A6NFQ2 919 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 ZNF839A8K0R7 811 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 C5orf58C9J3I9 102 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 MEFVO15553 781 aaPredicted RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CACHD1Q5VU97 1274 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 KRT80Q6KB66 452 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PLD4Q96BZ4 506 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 CCT8L2Q96SF2 557 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 COPS7BQ9H9Q2 264 aaPredicted RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 EVA1BQ9NVM1 165 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 COMMD8Q9NX08 183 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.42□□□□□ -0.58
POLR1B-202ENST00000333990 FBXO10Q9UK96 956 aa11.42□□□□□ -0.58
POLR1B-202ENST00000333990 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 CCL16O15467 120 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 RIPK2O43353 540 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 CATP04040 527 aaKnown RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ADRA1DP25100 572 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 KCNK10P57789 538 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 TAS2R40P59535 323 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 TRIP4Q15650 581 aaPredicted RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ZNF697Q5TEC3 545 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 LRRC8EQ6NSJ5 796 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 POTEHQ6S545 545 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ARID3BQ8IVW6 561 aaPredicted RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 RMDN2Q96LZ7 410 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms