RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GIT1Q9Y2X7 761 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 TCRBV9S1A1TA0A576 114 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 AMHP03971 560 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 HALP42357 657 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 DMC1Q14565 340 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 QPCTQ16769 361 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 MED8Q96G25 268 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 KLRG2A4D1S0 409 aaPredicted RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 FGF10O15520 208 aaPredicted RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 OCA2Q04671 838 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 PRKAA1Q13131 559 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 AASDHQ4L235 1098 aaPredicted RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 OMDQ99983 421 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 CAAP1Q9H8G2 361 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 MORF4L1Q9UBU8 362 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 FAM32AQ9Y421 112 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 SNX3O60493 162 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 CPSF4O95639 269 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 PSMA4P25789 261 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 NR6A1Q15406 480 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 PCID2Q5JVF3 399 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 SCARA3Q6AZY7 606 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 ALG9Q9H6U8 611 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 IKBKEQ14164 716 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 PYROXD2Q8N2H3 581 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 P2RY11Q96G91 374 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 ENO4A6NNW6 628 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 SLCO1B7G3V0H7 640 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 PIGNO95427 931 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 SLC2A4P14672 509 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 TSPAN8P19075 237 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 RPL9P32969 192 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 GALNT3Q14435 633 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
VSTM4-202ENST00000332853 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 CATSPERZQ9NTU4 200 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 CCDC167Q9P0B6 97 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 ANKRD6Q9Y2G4 727 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 LAMB4A4D0S4 1761 aa13.23□□□□□ -0.29
VSTM4-202ENST00000332853 CFHP08603 1231 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 HOXC6P09630 235 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 LMO2P25791 158 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CTBP1Q13363 440 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 NEPROQ6NW34 567 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 TAS2R13Q9NYV9 303 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 MDM4O15151 490 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 HIST2H2ACQ16777 129 aaPredicted RBP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 POM121L1PQ3SYA9 428 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 HIST2H2AA3Q6FI13 130 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 RETSATQ6NUM9 610 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CFAP52Q8N1V2 620 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 TBC1D19Q8N5T2 526 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CENPTQ96BT3 561 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 EBNA1BP2Q99848 306 aaKnown RBP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ZYG11BQ9C0D3 744 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SLC7A5P2Q9GIP4 190 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SYNDIG1Q9H7V2 258 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 DCLRE1BQ9H816 532 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CAB39LQ9H9S4 337 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ADGRA3Q8IWK6 1321 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 A0A1W2PQH9 124 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ZMPSTE24O75844 475 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ARIH2O95376 493 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ABHD2P08910 425 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SPATA31D3P0C874 917 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 DRD4P21917 467 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ABL2P42684 1182 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CDKN2BP42772 138 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 STARD3Q14849 445 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 KCNA10Q16322 511 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 RIPOR1Q6ZS17 1223 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SPATA31D4Q6ZUB0 917 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 KLHL5Q96PQ7 755 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 TRIM45Q9H8W5 580 aaPredicted RBP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CAPN10Q9HC96 672 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SLC17A7Q9P2U7 560 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 HMGXB4Q9UGU5 601 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 PLA2G4CQ9UP65 541 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 DERAQ9Y315 318 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SF3B1O75533 1304 aaKnown RBP eCLIP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CABYRO75952 493 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 GBE1Q04446 702 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 GRIK3Q13003 919 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 ATP6AP1LQ52LC2 224 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms