RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CASP3P42574 277 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 GJA9P57773 515 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PTP4A2Q12974 167 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 IKBKEQ14164 716 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 FLOT2Q14254 428 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 DLG2Q15700 870 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 C6orf132Q5T0Z8 1188 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PIWIL3Q7Z3Z3 882 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 FBXL6Q8N531 539 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 OR5H6Q8NGV6 325 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 KCNK16Q96T55 309 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 C20orf27Q9GZN8 174 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 DBNDD1Q9H9R9 158 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 DDX4Q9NQI0 724 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 COQ3Q9NZJ6 369 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 DGKBQ9Y6T7 804 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 RBBP6Q7Z6E9 1792 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 NFASCO94856 1347 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PRSS51A0A1B0GVH4 220 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 EEF1DP29692 281 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 SLC26A3P40879 764 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 CBX5P45973 191 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PRKAA2P54646 552 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 IRF5Q13568 498 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 NEDD8Q15843 81 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 CCDC142Q17RM4 750 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 EFHC2Q5JST6 749 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 GPATCH4Q5T3I0 446 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 IQSEC1Q6DN90 963 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 TTC33Q6PID6 262 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ATG14Q6ZNE5 492 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 FKBP9P1Q75LS8 142 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF354CQ86Y25 554 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 SLC4A11Q8NBS3 891 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PDCD6IPQ8WUM4 868 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 TMEM174Q8WUU8 243 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 RASSF5Q8WWW0 418 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 VPS33AQ96AX1 596 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PCDHB18PQ96TA0 734 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 PAFAH2Q99487 392 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 SERPINB13Q9UIV8 391 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ZHX2Q9Y6X8 837 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 A0A0B4J269 797 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 IGKV6D-41A0A0C4DH26 115 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 NOP56O00567 594 aaKnown RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 PMM2O15305 246 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 MTSS1O43312 755 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 SCO1O75880 301 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 FAM13AO94988 1023 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 GNAO1P09471 354 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 XRCC1P18887 633 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 MX2P20592 715 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 OR3A3P47888 321 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 POLD2P49005 469 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 CLCNKBP51801 687 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 TUBB3Q13509 450 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 PPP1R3AQ16821 1122 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ANO4Q32M45 955 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 HHIPL2Q6UWX4 724 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 FAM109AQ8N4B1 249 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 BHLHE22Q8NFJ8 381 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 SERAC1Q96JX3 654 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 TMEM246Q9BRR3 403 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 MTG1Q9BT17 334 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 HEMGNQ9BXL5 484 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 HMG20AQ9NP66 347 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 UBE2TQ9NPD8 197 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 DNAJC28Q9NX36 388 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 AP3M1Q9Y2T2 418 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 A0A1W2PQ72 361 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 C12orf71A8MTZ7 269 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 INO80B-WBP1J3KQ70 363 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 GARTP22102 1010 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 CHRNA5P30532 468 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ECE1P42892 770 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 GPX6P59796 221 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 GABPAQ06546 454 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 KLF1Q13351 362 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 SHEQ5VZ18 495 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 RINT1Q6NUQ1 792 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ZFP1Q6P2D0 407 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ASIC4Q96FT7 647 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF560Q96MR9 790 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 KLHL32Q96NJ5 620 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 ACAT2Q9BWD1 397 aa12.07□□□□□ -0.48
SHMT2-201ENST00000328923 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.07□□□□□ -0.48
SHMT2-201ENST00000328923 AKIP1Q9NQ31 210 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms