RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ALOX15P16050 662 aaPredicted RBP22.82■■□□□ 1.24
PNKP-201ENST00000322344 HADHAP40939 763 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 HARS2P49590 506 aaKnown RBP22.82■■□□□ 1.24
PNKP-201ENST00000322344 RAB27AP51159 221 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 ABCE1P61221 599 aaKnown RBP22.82■■□□□ 1.24
PNKP-201ENST00000322344 OLIG2Q13516 323 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 RCN2Q14257 317 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 ACSBG2Q5FVE4 666 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 TAC4Q86UU9 113 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 KLHDC8BQ8IXV7 354 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 SREK1Q8WXA9 508 aaKnown RBP22.82■■□□□ 1.24
PNKP-201ENST00000322344 STMN2Q93045 179 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 RTP3Q9BQQ7 232 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 EBF4Q9BQW3 602 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 DMAP1Q9NPF5 467 aaPredicted RBP22.82■■□□□ 1.24
PNKP-201ENST00000322344 IL1RAPL1Q9NZN1 696 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 MYADML2A6NDP7 307 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 F8W8V4 182 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 CHRNA1P02708 482 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 CPA2P48052 419 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 CDH17Q12864 832 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 TUBB3Q13509 450 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 CCDC6Q16204 474 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 FSTL4Q6MZW2 842 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 RBM15BQ8NDT2 890 aaKnown RBP22.82■■□□□ 1.24
PNKP-201ENST00000322344 DPF3Q92784 378 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 RNF34Q969K3 372 aa22.82■■□□□ 1.24
PNKP-201ENST00000322344 ZNF623O75123 536 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 PSMG1O95456 288 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 HTR7P34969 479 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 MGAT3Q09327 533 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 TSNAXIP1Q2TAA8 658 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 GNASQ5JWF2 1037 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 GDF6Q6KF10 455 aaPredicted RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 CTU1Q7Z7A3 348 aaKnown RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 CMC1Q7Z7K0 106 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 SERINC5Q86VE9 423 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 KCNMB4Q86W47 210 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 OR6Y1Q8NGX8 325 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 SORT1Q99523 831 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 MID2Q9UJV3 735 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 PLA2G4CQ9UP65 541 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 ZNF638Q14966 1978 aaKnown RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 MYO18AQ92614 2054 aaKnown RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 PRR5-ARHGAP8B1AHC4 643 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 ATP9BO43861 1147 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 H2AFYO75367 372 aaKnown RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 TM7SF2O76062 418 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 JCHAINP01591 159 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 CTSHP09668 335 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 SRGAP2BP0DMP2 458 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 ARHGAP8P85298 464 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 MPP3Q13368 585 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 NAA25Q14CX7 972 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 RABGAP1LQ5R372 815 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 CERCAMQ5T4B2 595 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 C6orf163Q5TEZ5 329 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 NET1Q7Z628 596 aaPredicted RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 CLEC14AQ86T13 490 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 DQX1Q8TE96 717 aaKnown RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 C20orf96Q9NUD7 363 aaPredicted RBP22.81■■□□□ 1.24
PNKP-201ENST00000322344 SNX10Q9Y5X0 201 aa22.81■■□□□ 1.24
PNKP-201ENST00000322344 CACNG3O60359 315 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 CIB2O75838 187 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 IGLV3-25P01717 112 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 KDSRQ06136 332 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 RCN1Q15293 331 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 MAPRE1Q15691 268 aaKnown RBP22.8■■□□□ 1.24
PNKP-201ENST00000322344 GPR162Q16538 588 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 HSP90AA5PQ58FG0 334 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 SCUBE1Q8IWY4 988 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 DOCK3Q8IZD9 2030 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 MFSD3Q96ES6 412 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 AGAP2Q99490 1192 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 RHOBTB2Q9BYZ6 727 aa22.8■■□□□ 1.24
PNKP-201ENST00000322344 AAR2Q9Y312 384 aaKnown RBP22.8■■□□□ 1.24
PNKP-201ENST00000322344 A0A096LPK6 155 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 TMEM114B3SHH9 223 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 TNPO2O14787 897 aaKnown RBP22.79■■□□□ 1.24
PNKP-201ENST00000322344 LIN7AO14910 233 aaPredicted RBP22.79■■□□□ 1.24
PNKP-201ENST00000322344 BDNFP23560 247 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 CCNCP24863 283 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 VHLP40337 213 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 HUNKP57058 714 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 SLC34A1Q06495 639 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 SMAD1Q15797 465 aaKnown RBP22.79■■□□□ 1.24
PNKP-201ENST00000322344 BRMS1LQ5PSV4 323 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 PDPK2PQ6A1A2 396 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 ZSCAN18Q8TBC5 510 aaPredicted RBP22.79■■□□□ 1.24
PNKP-201ENST00000322344 URGCPQ8TCY9 931 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 WDR60Q8WVS4 1066 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 FAM161BQ96MY7 647 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 PAAF1Q9BRP4 392 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 MCMBPQ9BTE3 642 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 ARHGEF38Q9NXL2 777 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 STX18Q9P2W9 335 aaKnown RBP22.79■■□□□ 1.24
PNKP-201ENST00000322344 PCDHB12Q9Y5F1 795 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 CDY1Q9Y6F8 540 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 ARHGEF37A1IGU5 675 aa22.79■■□□□ 1.24
PNKP-201ENST00000322344 APOA4P06727 396 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms