RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 VILLO15195 856 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 ZMPSTE24O75844 475 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 TMCC1O94876 653 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 MAP3K6O95382 1288 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 CST5P28325 142 aaPredicted RBP17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 TLR1Q15399 786 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 UNC5AQ6ZN44 842 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 CCDC33Q8N5R6 958 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 SNX25Q9H3E2 840 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 DNAAF2Q9NVR5 837 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 USP18Q9UMW8 372 aa17.58■□□□□ 0.4
SCAMP4-201ENST00000316097 KCNA4P22459 653 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 FDFT1P37268 417 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 SLC1A6P48664 564 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 CDH6P55285 790 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 ITGA9Q13797 1035 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 CDO1Q16878 200 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 C15orf59Q2T9L4 293 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 TEDDM1Q5T9Z0 273 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 SLC2A14Q8TDB8 520 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 LRRN4Q8WUT4 740 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 APBB2Q92870 758 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 GLT1D1Q96MS3 346 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 BTBD9Q96Q07 612 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 RSAD1Q9HA92 442 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 PAK5Q9P286 719 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 LAMA2P24043 3122 aaKnown RBP17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 F8W810 466 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 H3BNX3 289 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 HUS1O60921 280 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 CLPTM1O96005 669 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 THP07101 528 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 ITGAXP20702 1163 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 L1CAMP32004 1257 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 BTKQ06187 659 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 TBL3Q12788 808 aaKnown RBP17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 MBLAC2Q68D91 279 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 MAVSQ7Z434 540 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 TRIM74Q86UV6 250 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 TRIM73Q86UV7 250 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 NDRG1Q92597 394 aaKnown RBP17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 DDX18Q9NVP1 670 aaKnown RBP17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 PTCH2Q9Y6C5 1203 aa17.57■□□□□ 0.4
SCAMP4-201ENST00000316097 TRUB2O95900 331 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 TFAP2AP05549 437 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 NCF2P19878 526 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 TKTP29401 623 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 PMLP29590 882 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 RPL5P46777 297 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 TRIM71Q2Q1W2 868 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 KIAA0319Q5VV43 1072 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 PDPK2PQ6A1A2 396 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 B3GNT6Q6ZMB0 384 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 FNIP1Q8TF40 1166 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 PNPOQ9NVS9 261 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 RHBDL2Q9NX52 303 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 CASQ2O14958 399 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 XPOTO43592 962 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 AP1G1O43747 822 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 PFDN1O60925 122 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 ALDH1A3P47895 512 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 MBTPS1Q14703 1052 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 PKDCCQ504Y2 493 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 VWA5B1Q5TIE3 1220 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 KLHDC10Q6PID8 442 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 FRMD7Q6ZUT3 714 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 SLC35F5Q8WV83 523 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 MCRS1Q96EZ8 462 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 ZNF560Q96MR9 790 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 PEBP4Q96S96 227 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 SIKE1Q9BRV8 207 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 USP29Q9HBJ7 922 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 HMX1Q9NP08 348 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 THSD7BQ9C0I4 1608 aa17.56■□□□□ 0.4
SCAMP4-201ENST00000316097 A0A1W2PQ45 241 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 A0A1W2PQY0 241 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 GSRP00390 522 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 FGF3P11487 239 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 CKBP12277 381 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 LCP1P13796 627 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 GABRB2P47870 512 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 IDH3AP50213 366 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 SV2CQ496J9 727 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 NADK2Q4G0N4 442 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 SH2D4BQ5SQS7 431 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 FBXW8Q8N3Y1 598 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 DEPDC1BQ8WUY9 529 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 TFB1MQ8WVM0 346 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 DCUN1D1Q96GG9 259 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 CHST12Q9NRB3 414 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 PCDHGB4Q9UN71 923 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 PCDHGB5Q9Y5G0 923 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 HEY1Q9Y5J3 304 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 PEX1O43933 1283 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms