RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ASNSD1Q9NWL6 643 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 ARHGAP20Q9P2F6 1191 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 APEX2Q9UBZ4 518 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 FTSJ1Q9UET6 329 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 AJAP1Q9UKB5 411 aaPredicted RBP17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3DA0A087WVF3 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3IA0A087WXS9 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3EA0A087X179 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3KA0A087X1G2 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 A0A1B0GVM2 712 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3FA6NER0 549 aaPredicted RBP17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TCAF2A6NFQ2 919 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3LB9A6J9 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 LATO43561 262 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 RTN2O75298 545 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3HP0C7X1 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 PON1P27169 355 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 GGCXP38435 758 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 COL28A1Q2UY09 1125 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 EFHC1Q5JVL4 640 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 RABGAP1LQ5R372 815 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3GQ6DHY5 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3CQ6IPX1 549 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 GBP6Q6ZN66 633 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 FAM183BPQ6ZVS7 135 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 C14orf80Q86SX3 495 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TBC1D3Q8IZP1 549 aaPredicted RBP17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 FAM131CQ96AQ9 280 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 SKA1Q96BD8 255 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 RPRD1AQ96P16 312 aaPredicted RBP17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 DKK4Q9UBT3 224 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 VANGL2Q9ULK5 521 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 PCDHGC3Q9UN70 934 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 OR51B4Q9Y5P0 310 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 HS3ST4Q9Y661 456 aa17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 COL5A1P20908 1838 aaPredicted RBP17.97■□□□□ 0.47
EXOSC4-201ENST00000316052 TLR4O00206 839 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 ATP9BO43861 1147 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 HSF2BPO75031 334 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 ERBB2P04626 1255 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 VASPP50552 380 aaPredicted RBP17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 NXPH1P58417 271 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 BNIP3Q12983 259 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 NME3Q13232 169 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 DLG2Q15700 870 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 EXOC3L4Q17RC7 722 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 TTC39BQ5VTQ0 682 aaPredicted RBP17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 OR6B2Q6IFH4 312 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 OLFML1Q6UWY5 402 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 C11orf57Q6ZUT1 292 aaPredicted RBP17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 SPATS2Q86XZ4 545 aaKnown RBP17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 C1orf131Q8NDD1 294 aaKnown RBP17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 HNRNPLLQ8WVV9 542 aaKnown RBP17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 FAM81BQ96LP2 452 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 SIX2Q9NPC8 291 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 GDF3Q9NR23 364 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 KIAA1468Q9P260 1216 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 PPM1HQ9ULR3 514 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 MYLKQ15746 1914 aa17.96■□□□□ 0.47
EXOSC4-201ENST00000316052 TDRD6O60522 2096 aaKnown RBP17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 FOXN3O00409 490 aaPredicted RBP17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 ENC1O14682 589 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 PAGE1O75459 146 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 LDOC1O95751 146 aaPredicted RBP17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 ITGAVP06756 1048 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 CLCN1P35523 988 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 OXCT1P55809 520 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 CLDN6P56747 220 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 CNTN1Q12860 1018 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 DNAJC3Q13217 504 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 CAMK4Q16566 473 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 INAVAQ3KP66 663 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 POM121L1PQ3SYA9 428 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 ACCSLQ4AC99 568 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 OTUD1Q5VV17 481 aaPredicted RBP17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 PDZD3Q86UT5 571 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 EID2Q8N6I1 236 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 OR8D1Q8WZ84 308 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 ANLNQ9NQW6 1124 aa17.95■□□□□ 0.46
EXOSC4-201ENST00000316052 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 I6L893 689 aaPredicted RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 PLRG1O43660 514 aaKnown RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 CNTN5O94779 1100 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 MT-CO1P00395 513 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 PNMA6AP0CW24 399 aaPredicted RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 TFE3P19532 575 aaPredicted RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 MAT2AP31153 395 aaKnown RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 RXRGP48443 463 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 SLC6A3Q01959 620 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 PTK2Q05397 1052 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 ZNF177Q13360 481 aaPredicted RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 C5orf22Q49AR2 442 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 PTPN20Q4JDL3 420 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 AGBL4Q5VU57 503 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 Q6ZVU0 165 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 SLC26A9Q7LBE3 791 aa17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 PRPF39Q86UA1 669 aaKnown RBP17.94■□□□□ 0.46
EXOSC4-201ENST00000316052 SLC47A2Q86VL8 602 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms