RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 GFRA3O60609 400 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 ALDH1A2O94788 518 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 TMEM253P0C7T8 217 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 CAMK2GQ13555 558 aaPredicted RBP17.56■□□□□ 0.4
PUF60-201ENST00000313352 SLC12A1Q13621 1099 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 MAP7D1Q3KQU3 841 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 ATP13A4Q4VNC1 1196 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 KIAA1324Q6UXG2 1013 aaKnown RBP17.56■□□□□ 0.4
PUF60-201ENST00000313352 LEKR1Q6ZMV7 388 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 SETD3Q86TU7 594 aaPredicted RBP17.56■□□□□ 0.4
PUF60-201ENST00000313352 DEFB119Q8N690 84 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 CTNNBL1Q8WYA6 563 aaPredicted RBP17.56■□□□□ 0.4
PUF60-201ENST00000313352 PTPRN2Q92932 1015 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 SPON2Q9BUD6 331 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 TMEM51Q9NW97 253 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 TMEM248Q9NWD8 314 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 CYP8B1Q9UNU6 501 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 MFHAS1Q9Y4C4 1052 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 NPC1O15118 1278 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 SMAD6O43541 496 aaKnown RBP17.56■□□□□ 0.4
PUF60-201ENST00000313352 RHOQP17081 205 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 GOT1P17174 413 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 P2RY2P41231 377 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 SLC25A11Q02978 314 aaKnown RBP17.56■□□□□ 0.4
PUF60-201ENST00000313352 GNA12Q03113 381 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 STARD3Q14849 445 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 C9orf64Q5T6V5 341 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 CEP68Q76N32 757 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 SLC35G2Q8TBE7 412 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 FRS2Q8WU20 508 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 KLC2Q9H0B6 622 aa17.56■□□□□ 0.4
PUF60-201ENST00000313352 TMEM110-MUSTN1A8MSY1 372 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 MYO1FO00160 1098 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 ZMPSTE24O75844 475 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 ASLP04424 464 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 SRPRAP08240 638 aaKnown RBP17.55■□□□□ 0.4
PUF60-201ENST00000313352 RARAP10276 462 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 TAS2R40P59535 323 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 ARF5P84085 180 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 PIGHQ14442 188 aaPredicted RBP17.55■□□□□ 0.4
PUF60-201ENST00000313352 HNRNPA1L2Q32P51 320 aaKnown RBP17.55■□□□□ 0.4
PUF60-201ENST00000313352 PPP6R3Q5H9R7 873 aaPredicted RBP17.55■□□□□ 0.4
PUF60-201ENST00000313352 C6orf118Q5T5N4 469 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 RAD9BQ6WBX8 426 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 TP53INP2Q8IXH6 220 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 NIPA2Q8N8Q9 360 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 HSPH1Q92598 858 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 DUSP15Q9H1R2 295 aaPredicted RBP17.55■□□□□ 0.4
PUF60-201ENST00000313352 PRDM16Q9HAZ2 1276 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 IP6K2Q9UHH9 426 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 WDR87Q6ZQQ6 2873 aa17.55■□□□□ 0.4
PUF60-201ENST00000313352 ILVBLA1L0T0 632 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 RNF103O00237 685 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CBX4O00257 560 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CD160O95971 181 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 SRCP12931 536 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 PCK1P35558 622 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 METAP1P53582 386 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 ST8SIA6P61647 398 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CCDC6Q16204 474 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 PLK5Q496M5 336 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 ACBD5Q5T8D3 534 aaPredicted RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 TMEM139Q8IV31 216 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 ARHGEF2Q92974 986 aaKnown RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 PANX2Q96RD6 677 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CWC15Q9P013 229 aaKnown RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 HYOU1Q9Y4L1 999 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 IGHV1OR15-9A0A0B4J2B8 117 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 RCCD1A6NED2 376 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CD48P09326 243 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 FECHP22830 423 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CNR2P34972 360 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 GJC1P36383 396 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 AIF1P55008 147 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 TPI1P60174 286 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 RPS14P62263 151 aaKnown RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 DLG2Q15700 870 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 ACCSLQ4AC99 568 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 USP39Q53GS9 565 aaKnown RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 Q6ZVU0 165 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 STK40Q8N2I9 435 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 SH2D3CQ8N5H7 860 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 RTL3Q8N8U3 475 aaKnown RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 OR2T3Q8NH03 318 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 SIPA1Q96FS4 1042 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 FAM129BQ96TA1 746 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 EPAS1Q99814 870 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 ATP13A1Q9HD20 1204 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 REXO2Q9Y3B8 237 aaKnown RBP17.54■□□□□ 0.4
PUF60-201ENST00000313352 CHD5Q8TDI0 1954 aa17.54■□□□□ 0.4
PUF60-201ENST00000313352 CFAP54Q96N23 3096 aa17.53■□□□□ 0.4
PUF60-201ENST00000313352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.53■□□□□ 0.4
PUF60-201ENST00000313352 EEF2KO00418 725 aaKnown RBP17.53■□□□□ 0.4
PUF60-201ENST00000313352 BNIP3LO60238 219 aa17.53■□□□□ 0.4
PUF60-201ENST00000313352 DESP17661 470 aa17.53■□□□□ 0.4
PUF60-201ENST00000313352 CDC25BP30305 580 aa17.53■□□□□ 0.4
PUF60-201ENST00000313352 SSR1P43307 286 aaKnown RBP17.53■□□□□ 0.4
PUF60-201ENST00000313352 MAGEA1P43355 309 aa17.53■□□□□ 0.4
PUF60-201ENST00000313352 MESDQ14696 234 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms