RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 E2F8A0AVK6 867 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 E9PAM4 449 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 GSTA4O15217 222 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PRLRP16471 622 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 RHOQP17081 205 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 DPP6P42658 865 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PSMD8P48556 350 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 SERPINH1P50454 418 aaKnown RBP9.44□□□□□ -0.9
PTPRE-202ENST00000306042 CDH4P55283 916 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PDGFRLQ15198 375 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 TEAD2Q15562 447 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PARP15Q460N3 678 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 C2orf27AQ580R0 203 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 MROH9Q5TGP6 573 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PPFIBP2Q8ND30 876 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 FBXO36Q8NEA4 188 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 KLHDC9Q8NEP7 349 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 YJEFN3A6XGL0 299 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 E7ENQ6 273 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 TIMM44O43615 452 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 APOA4P06727 396 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ERVK-10P10266 1014 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 HAPLN1P10915 354 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 YBEYP58557 167 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 DEFB103AP81534 67 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 TBX2Q13207 712 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 C12orf76Q8N812 135 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 OR6K2Q8NGY2 324 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 GDPD5Q8WTR4 605 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 CCDC3Q9BQI4 270 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 TRABDQ9H4I3 376 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 SYTL2Q9HCH5 934 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ZFP37Q9Y6Q3 630 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 LRRC72A6NJI9 287 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ERI2A8K979 691 aaKnown RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 SPAG7O75391 227 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ELFN1P0C7U0 828 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 CLCN6P51797 869 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 MAGOHP61326 146 aaKnown RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 PARP6Q2NL67 630 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ATP13A4Q4VNC1 1196 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 AGAP9Q5VTM2 703 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 TSTD1Q8NFU3 115 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 OR14C36Q8NHC7 312 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ZSCAN18Q8TBC5 510 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 SPATA17Q96L03 361 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 C8orf48Q96LL4 319 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 TRIM55Q9BYV6 548 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ISCUQ9H1K1 167 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 TMEM191CA6NGB0 347 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 CACNB4O00305 520 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 PJA2O43164 708 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 PRMT3O60678 531 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 RPN2P04844 631 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 KELP23276 732 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 BCAS4Q8TDM0 211 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 LRGUKQ96M69 825 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 ZDHHC4Q9NPG8 344 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 APOBEC2Q9Y235 224 aaKnown RBP9.43□□□□□ -0.9
PTPRE-202ENST00000306042 A0A0A0MRY4 1105 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 C1orf232A0A0U1RR37 186 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 GNSP15586 552 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 POU4F1Q01851 419 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 MFSD4BQ5TF39 518 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 WFIKKN2Q8TEU8 576 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 RMDN2Q96LZ7 410 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 SPATA13Q96N96 652 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 PANX3Q96QZ0 392 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 KDM4CQ9H3R0 1056 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 GKN1Q9NS71 199 aa9.43□□□□□ -0.9
PTPRE-202ENST00000306042 PPP1R37O75864 691 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 KITP10721 976 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MYL2P10916 166 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 STMN1P16949 149 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ITGB6P18564 788 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 HTR7P34969 479 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 DGKEP52429 567 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MAXP61244 160 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ART3Q13508 389 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 TRADDQ15628 312 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 CCDC38Q502W7 563 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PRPF39Q86UA1 669 aaKnown RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 KIRREL3Q8IZU9 778 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 HDDC3Q8N4P3 179 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 AGR3Q8TD06 166 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 FEM1CQ96JP0 617 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 RAB3IPQ96QF0 476 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PCDHB18PQ96TA0 734 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 MLXIPLQ9NP71 852 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PDLIM7Q9NR12 457 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 RNF112Q9ULX5 631 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 ERVW-1Q9UQF0 538 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 STYXL1Q9Y6J8 313 aa9.42□□□□□ -0.9
PTPRE-202ENST00000306042 PIRO00625 290 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms