RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PCDH9Q9HC56 1237 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CISHQ9NSE2 258 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 TDP1Q9NUW8 608 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 DNPEPQ9ULA0 475 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SHOC2Q9UQ13 582 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 NAALADL1Q9UQQ1 740 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 INVSQ9Y283 1065 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CEP83Q9Y592 693 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 VWA8A3KMH1 1905 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 DCHS1Q96JQ0 3298 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 ZNF292O60281 2723 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CCDC189A1A4V9 331 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 TCP11X1B4DZS4 312 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SCAMP3O14828 347 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SUN1O94901 812 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 GJB6O95452 261 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 EGFP01133 1207 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CREB1P16220 341 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 PNPLA4P41247 253 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CDKN2BP42772 138 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SSR1P43307 286 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 IFNAR2P48551 515 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 VPS41P49754 854 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 GTF2A1P52655 376 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 MYL6P60660 151 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 PSMC1P62191 440 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 RBP5P82980 135 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 OGDHQ02218 1023 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SF3A2Q15428 464 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 TAZQ16635 292 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 P3H1Q32P28 736 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 GALNTL6Q49A17 601 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 PPM1JQ5JR12 505 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 RNASEH2BQ5TBB1 312 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 FSTL4Q6MZW2 842 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 DCUN1D2Q6PH85 259 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 C1orf228Q6PIY5 440 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 GSTA5Q7RTV2 222 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 OSTM1Q86WC4 334 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 TTC30AQ86WT1 665 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SPATA2LQ8IUW3 424 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 CYP4X1Q8N118 509 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 WDTC1Q8N5D0 677 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 ARL14EPQ8N8R7 260 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 RIN3Q8TB24 985 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SLC35B2Q8TB61 432 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 C2orf15Q8WU43 125 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 MCEEQ96PE7 176 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 HHIPQ96QV1 700 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 IER2Q9BTL4 223 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 MTMR12Q9C0I1 747 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 XYLT2Q9H1B5 865 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 VRTNQ9H8Y1 702 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 HPS4Q9NQG7 708 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 DNAJC17Q9NVM6 304 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 HAUS2Q9NVX0 235 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 DUS2Q9NX74 493 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 OBP2AQ9NY56 170 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 NKIRAS1Q9NYS0 192 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 SENP1Q9P0U3 644 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 WDR35Q9P2L0 1181 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 FETUBQ9UGM5 382 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 ARL2BPQ9Y2Y0 163 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 WNT6Q9Y6F9 365 aa8.07□□□□□ -1.12
TM4SF1-201ENST00000305366 NCOR2Q9Y618 2525 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 C3orf70A6NLC5 250 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 SIGLEC16A6NMB1 481 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 F8VP50 259 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 SMAPO00193 183 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 ALOX15BO15296 676 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 PRPF4O43172 522 aaKnown RBP eCLIP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 MED7O43513 233 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 MGRN1O60291 552 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 RPP40O75818 363 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 CKMP06732 381 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 FAM200BP0CF97 657 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 CSH1P0DML2 217 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 CSH2P0DML3 217 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 VDRP11473 427 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 KRT10P13645 584 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 TCF4P15884 667 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 LMO2P25791 158 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 GJC1P36383 396 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 ASPAP45381 313 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 MNAT1P51948 309 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 MLLT6P55198 1093 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 SEC13P55735 322 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 RPL10AP62906 217 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 SMARCB1Q12824 385 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 TRPC3Q13507 836 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 CCINQ13939 588 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 MPP2Q14168 576 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 NFE2Q16621 373 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 ZNF699Q32M78 642 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 AASDHQ4L235 1098 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 ATP13A4Q4VNC1 1196 aa8.06□□□□□ -1.12
TM4SF1-201ENST00000305366 INTS6LQ5JSJ4 861 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms