RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TM7SF2O76062 418 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 RALBP11234 206 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 CD68P34810 354 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-204ENST00000300862 PSEN2P49810 448 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 IDH3AP50213 366 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 ADAM17P78536 824 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 CCL14Q16627 93 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 RABGAP1LQ5R372 815 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 C1orf146Q5VVC0 180 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
HIF3A-204ENST00000300862 TOP6BLQ8N6T0 577 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 GSTCDQ8NEC7 633 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 PCED1BQ96HM7 432 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 SENP8Q96LD8 212 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 TTC1Q99614 292 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 IGSF9Q9P2J2 1179 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 APOBEC2Q9Y235 224 aaKnown RBP13.19□□□□□ -0.3
HIF3A-204ENST00000300862 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 MAGEC1O60732 1142 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 SIN3BO75182 1162 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 USP1O94782 785 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 BAG2O95816 211 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 SKIP12755 728 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CPA3P15088 417 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 NCF2P19878 526 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-204ENST00000300862 AXLP30530 894 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CDC42EP1Q00587 391 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
HIF3A-204ENST00000300862 NAPRTQ6XQN6 538 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
HIF3A-204ENST00000300862 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 PPP4R1Q8TF05 950 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 PPP1R36Q96LQ0 422 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 GAD1Q99259 594 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 PAAF1Q9BRP4 392 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 MLPHQ9BV36 600 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-204ENST00000300862 SHROOM3Q8TF72 1996 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 ZCWPW2A0A1B0GU75 182 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CD1EP15812 388 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 NFKB1P19838 968 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CPOXP36551 454 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CLCNKBP51801 687 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 DAOAP59103 153 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 ABCE1P61221 599 aaKnown RBP13.18□□□□□ -0.3
HIF3A-204ENST00000300862 ANKRD20A4Q4UJ75 823 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 GATA6Q92908 595 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 TRAPPC9Q96Q05 1148 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CPNE1Q99829 537 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-204ENST00000300862 LRRC40Q9H9A6 602 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
HIF3A-204ENST00000300862 GABRDO14764 452 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 CIB2O75838 187 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 PDE5AO76074 875 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 AP2A1O95782 977 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 JCHAINP01591 159 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 AOC1P19801 751 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 EPHB1P54762 984 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 SPANXN3Q5MJ09 141 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 PHTF2Q8N3S3 785 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 KCTD13Q8WZ19 329 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
HIF3A-204ENST00000300862 RBBP8Q99708 897 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 TRIM4Q9C037 500 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
HIF3A-204ENST00000300862 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 PPM1HQ9ULR3 514 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 A0A088AWK7 358 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 A0A096LPK6 155 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 A0A1B0GVG6 124 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 CCR10P46092 362 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 POLE2P56282 527 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 GRTP1Q5TC63 336 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 ZNF781Q8N8C0 355 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 CCDC124Q96CT7 223 aaKnown RBP13.17□□□□□ -0.3
HIF3A-204ENST00000300862 TKTL2Q9H0I9 626 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 IARS2Q9NSE4 1012 aaKnown RBP13.17□□□□□ -0.3
HIF3A-204ENST00000300862 SOX13Q9UN79 622 aa13.17□□□□□ -0.3
HIF3A-204ENST00000300862 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 E9PBE3 544 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 ZNF195O14628 629 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 KLHL41O60662 606 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 LTFP02788 710 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 CTSHP09668 335 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 NMBRP28336 390 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 CRYBB1P53674 252 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms